RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 FAM227AF5H4B4 570 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 APAF1O14727 1248 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 TPP1O14773 563 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 B3GALT2O43825 422 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 UBXN7O94888 489 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 ALDH2P05091 517 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 LTA4HP09960 611 aaKnown RBP6.25□□□□□ -1.41
CPNE3-213ENST00000622183 MYBP10242 640 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 GAAP10253 952 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 CTSSP25774 331 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 POLD1P28340 1107 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 IL12RB1P42701 662 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 ETV4P43268 484 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 DLG4P78352 724 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 CD69Q07108 199 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 TOP3AQ13472 1001 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-213ENST00000622183 SMAD4Q13485 552 aaKnown RBP6.25□□□□□ -1.41
CPNE3-213ENST00000622183 PICALMQ13492 652 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 COBLL1Q53SF7 1204 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 NBPF11Q86T75 865 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 FAM129CQ86XR2 697 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 UNC5BQ8IZJ1 945 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 FBXO15Q8NCQ5 510 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-213ENST00000622183 OR2I1PQ8NGU4 316 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 HOXB13Q92826 284 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-213ENST00000622183 MPHOSPH6Q99547 160 aaKnown RBP6.25□□□□□ -1.41
CPNE3-213ENST00000622183 C7orf25Q9BPX7 421 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 CDC42EP3Q9UKI2 254 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 VWA7Q9Y334 891 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 COMMD10Q9Y6G5 202 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 RPTORQ8N122 1335 aa6.25□□□□□ -1.41
CPNE3-213ENST00000622183 KLHL18O94889 574 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 PLA2G1BP04054 148 aaKnown RBP6.24□□□□□ -1.41
CPNE3-213ENST00000622183 ZNF28P17035 718 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 IL13P35225 146 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 IRAK1P51617 712 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 SESN2P58004 480 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-213ENST00000622183 IL10RAQ13651 578 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 SEPT2Q15019 361 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 NOMO1Q15155 1222 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 IL31Q6EBC2 164 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 PPP4R3AQ6IN85 833 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 TRMT10BQ6PF06 316 aaKnown RBP6.24□□□□□ -1.41
CPNE3-213ENST00000622183 KIAA0319LQ8IZA0 1049 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 IFNL2Q8IZJ0 200 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.24□□□□□ -1.41
CPNE3-213ENST00000622183 MORC4Q8TE76 937 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 PMF1-BGLAPU3KQ54 211 aa6.24□□□□□ -1.41
CPNE3-213ENST00000622183 SGTAO43765 313 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 AKR1B10O60218 316 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 PHF2O75151 1096 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 HMGCRP04035 888 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 RPLP2P05387 115 aaKnown RBP6.23□□□□□ -1.41
CPNE3-213ENST00000622183 HNRNPLP14866 589 aaKnown RBP eCLIP6.23□□□□□ -1.41
CPNE3-213ENST00000622183 RPL13P26373 211 aaKnown RBP6.23□□□□□ -1.41
CPNE3-213ENST00000622183 HTR1BP28222 390 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 STAT5BP51692 787 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 KCNQ1P51787 676 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 DSC2Q02487 901 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 OS9Q13438 667 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-213ENST00000622183 MST1LQ2TV78 715 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 C19orf54Q5BKX5 351 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 THEMIS2Q5TEJ8 643 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 TRIM68Q6AZZ1 485 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 C11orf96Q7Z7L8 435 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 CLEC14AQ86T13 490 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 TTC7BQ86TV6 843 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 NSUN6Q8TEA1 469 aaKnown RBP6.23□□□□□ -1.41
CPNE3-213ENST00000622183 FNIP1Q8TF40 1166 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 KAT5Q92993 513 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 GFM2Q969S9 779 aaKnown RBP6.23□□□□□ -1.41
CPNE3-213ENST00000622183 SIGLEC10Q96LC7 697 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 CGRRF1Q99675 332 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 LRFN3Q9BTN0 628 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 KMT5AQ9NQR1 393 aa6.23□□□□□ -1.41
CPNE3-213ENST00000622183 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-213ENST00000622183 SLC16A6O15403 523 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 PRAMEF4O60810 478 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 ENDOD1O94919 500 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 IFIT2P09913 472 aaKnown RBP6.22□□□□□ -1.41
CPNE3-213ENST00000622183 ECHS1P30084 290 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 NEK3P51956 506 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 AGFG1P52594 562 aaKnown RBP6.22□□□□□ -1.41
CPNE3-213ENST00000622183 FAM193AP78312 1265 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 LLGL1Q15334 1064 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 UBE3CQ15386 1083 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 ANO6Q4KMQ2 910 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 GORABQ5T7V8 394 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 TAS1R1Q7RTX1 841 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 TMEFF1Q8IYR6 380 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 FAM156AQ8NDB6 213 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 PIK3C3Q8NEB9 887 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 NUDT10Q8NFP7 164 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 SNX33Q8WV41 574 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 KCNN1Q92952 543 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 RGMAQ96B86 450 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 NUDT11Q96G61 164 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 B3GNT5Q9BYG0 378 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 KATNBL1Q9H079 304 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 MYH16Q9H6N6 1097 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms