RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.28□□□□□ -0.44
CLTC-215ENST00000621829 NXF1Q9UBU9 619 aaKnown RBP12.28□□□□□ -0.44
CLTC-215ENST00000621829 SRPRBQ9Y5M8 271 aaKnown RBP12.28□□□□□ -0.44
CLTC-215ENST00000621829 KIF14Q15058 1648 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 USP17L12C9JPN9 530 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 USP17L21D6R901 530 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 RNF103O00237 685 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 AGTP01019 485 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 MAPRE2Q15555 327 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 PPP6R3Q5H9R7 873 aaPredicted RBP12.28□□□□□ -0.44
CLTC-215ENST00000621829 AARS2Q5JTZ9 985 aaKnown RBP12.28□□□□□ -0.44
CLTC-215ENST00000621829 IFNEQ86WN2 208 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 MCRS1Q96EZ8 462 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 MTRQ99707 1265 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 TEKT3Q9BXF9 490 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
CLTC-215ENST00000621829 TMEM161AQ9NX61 479 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 SCN3BQ9NY72 215 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 KRT16P08779 473 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 SOX6P35712 828 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 PSMC6P62333 389 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 CNDP1Q96KN2 507 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 ADPGKQ9BRR6 497 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 BTBD7Q9P203 1132 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 DTNAQ9Y4J8 743 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 CACNA2D1P54289 1103 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 RNF25Q96BH1 459 aaPredicted RBP12.28□□□□□ -0.44
CLTC-215ENST00000621829 VPS39Q96JC1 886 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 PICK1Q9NRD5 415 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 SEL1LQ9UBV2 794 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 MED7O43513 233 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 MMP1P03956 469 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 POLA2Q14181 598 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 TRIP4Q15650 581 aaPredicted RBP12.28□□□□□ -0.44
CLTC-215ENST00000621829 KYNUQ16719 465 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 OR6B2Q6IFH4 312 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.28□□□□□ -0.443e-8■■■■■ 70.6
CLTC-215ENST00000621829 SARS2Q9NP81 518 aaKnown RBP12.28□□□□□ -0.44
CLTC-215ENST00000621829 TRIM10Q9UDY6 481 aa12.28□□□□□ -0.44
CLTC-215ENST00000621829 TEX33O43247 280 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 CCNE1P24864 410 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 CHRNA3P32297 505 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 KRT72Q14CN4 511 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 IZUMO3Q5VZ72 239 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 CCDC80Q76M96 950 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 EMILIN3Q9NT22 766 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 S100A9P06702 114 aaKnown RBP12.27□□□□□ -0.44
CLTC-215ENST00000621829 PLA2G4AP47712 749 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 FBXW4P57775 412 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 KRR1Q13601 381 aaKnown RBP12.27□□□□□ -0.44
CLTC-215ENST00000621829 SMARCAL1Q9NZC9 954 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 PCDHA4Q9UN74 947 aa12.27□□□□□ -0.44
CLTC-215ENST00000621829 LAD1O00515 517 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 AHCYL1O43865 530 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 LPCAT2Q7L5N7 544 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 MFN1Q8IWA4 741 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 MIEF2Q96C03 454 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 LRRC39Q96DD0 335 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 BPIFA3Q9BQP9 254 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 SEPT9Q9UHD8 586 aaPredicted RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 LGALS16A8MUM7 142 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 IL12RB1P42701 662 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 Q4G0T1 1027 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 KCNK16Q96T55 309 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 EML4Q9HC35 981 aaKnown RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 ITM2BQ9Y287 266 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 SYCP2Q9BX26 1530 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 XPOTO43592 962 aaKnown RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 CYTH3O43739 400 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 KRT28Q7Z3Y7 464 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 FGD2Q7Z6J4 655 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 RHPN2Q8IUC4 686 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 RUBCNQ92622 972 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 AK8Q96MA6 479 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 CEP72Q9P209 647 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 TLR3O15455 904 aaKnown RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 OASLQ15646 514 aaKnown RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 ARMCX4Q5H9R4 360 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 CCNI2Q6ZMN8 369 aaPredicted RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 ZFYVE1Q9HBF4 777 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 KLHL8Q9P2G9 620 aaPredicted RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 PEG3Q9GZU2 1588 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 TMEM120BA0PK00 339 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 M0R2C6 588 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 PYGMP11217 842 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 TRIM71Q2Q1W2 868 aaKnown RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 GALNT17Q6IS24 598 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 ZNF589Q86UQ0 364 aaPredicted RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 SPRTNQ9H040 489 aaPredicted RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 NFKBIL1Q9UBC1 381 aaPredicted RBP12.27□□□□□ -0.45
CLTC-215ENST00000621829 KCNG1Q9UIX4 513 aa12.27□□□□□ -0.45
CLTC-215ENST00000621829 ALBP02768 609 aa12.26□□□□□ -0.45
CLTC-215ENST00000621829 TYK2P29597 1187 aa12.26□□□□□ -0.45
CLTC-215ENST00000621829 GPC5P78333 572 aa12.26□□□□□ -0.45
CLTC-215ENST00000621829 TFAMQ00059 246 aaKnown RBP12.26□□□□□ -0.45
CLTC-215ENST00000621829 SPOUT1Q5T280 376 aaKnown RBP12.26□□□□□ -0.45
CLTC-215ENST00000621829 E4F1Q66K89 784 aaPredicted RBP12.26□□□□□ -0.45
CLTC-215ENST00000621829 RWDD4Q6NW29 188 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms