RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 MYBPC2Q14324 1141 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 NR1I3Q14994 352 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 SLC9C1Q4G0N8 1177 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 FILIP1LQ4L180 1135 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 CEP135Q66GS9 1140 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 IFNLR1Q8IU57 520 aaPredicted RBP11.67□□□□□ -0.54
CPNE3-212ENST00000621783 KIAA0319LQ8IZA0 1049 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 SPC24Q8NBT2 197 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 TMEM174Q8WUU8 243 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 CBWD1Q9BRT8 395 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 TUBGCP2Q9BSJ2 902 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 NFKBIZQ9BYH8 718 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 UNC93B1Q9H1C4 597 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
CPNE3-212ENST00000621783 GTF2IRD1Q9UHL9 959 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 USP20Q9Y2K6 914 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 EVPLQ92817 2033 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 A0A087WZ62 844 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 MOXD2PA6NHM9 499 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 LRRC10BA6NIK2 292 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 N4BP3O15049 544 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 TEX33O43247 280 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 EXOC3O60645 756 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 TPM2P07951 284 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 PSMC2P35998 433 aaKnown RBP11.66□□□□□ -0.54
CPNE3-212ENST00000621783 ACLYP53396 1101 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 POU5F1BQ06416 359 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 MAPK6Q16659 721 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 MAN2A1Q16706 1144 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 PTPN21Q16825 1174 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 FAM47CQ5HY64 1035 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 MIIPQ5JXC2 388 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 GDF6Q6KF10 455 aaPredicted RBP11.66□□□□□ -0.54
CPNE3-212ENST00000621783 ZNF410Q86VK4 478 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 SESTD1Q86VW0 696 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 VSTM4Q8IW00 320 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 TRIM59Q8IWR1 403 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 DRC7Q8IY82 874 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 FAM186BQ8IYM0 893 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 NLRP7Q8WX94 980 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 FDXACB1Q9BRP7 624 aaPredicted RBP11.66□□□□□ -0.54
CPNE3-212ENST00000621783 TSEN34Q9BSV6 310 aaKnown RBP11.66□□□□□ -0.54
CPNE3-212ENST00000621783 MKNK1Q9BUB5 465 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 NOC4LQ9BVI4 516 aaKnown RBP11.66□□□□□ -0.54
CPNE3-212ENST00000621783 TARS2Q9BW92 718 aaKnown RBP11.66□□□□□ -0.54
CPNE3-212ENST00000621783 MRPL4Q9BYD3 311 aaKnown RBP11.66□□□□□ -0.54
CPNE3-212ENST00000621783 PCIF1Q9H4Z3 704 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 MINDY3Q9H8M7 445 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 IFT122Q9HBG6 1241 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 PAK6Q9NQU5 681 aaPredicted RBP11.66□□□□□ -0.54
CPNE3-212ENST00000621783 HSPBP1Q9NZL4 362 aa11.66□□□□□ -0.54
CPNE3-212ENST00000621783 GRIN2DO15399 1336 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 INO80B-WBP1J3KQ70 363 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 PES1O00541 588 aaKnown RBP11.65□□□□□ -0.54
CPNE3-212ENST00000621783 CABYRO75952 493 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 CCL5P13501 91 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 GARTP22102 1010 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 ADSSP30520 456 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 NLRP11P59045 1033 aaKnown RBP11.65□□□□□ -0.54
CPNE3-212ENST00000621783 TMEM62Q0P6H9 643 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 MTFR1Q15390 333 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 VWA3BQ502W6 1294 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 ZPBP2Q6X784 338 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 TMC6Q7Z403 805 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 FRMD5Q7Z6J6 570 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 CTU1Q7Z7A3 348 aaKnown RBP11.65□□□□□ -0.54
CPNE3-212ENST00000621783 XXYLT1Q8NBI6 393 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 ZSWIM2Q8NEG5 633 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 DNAJB3Q8WWF6 145 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 POMGNT1Q8WZA1 660 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 BORCS6Q96GS4 357 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 INO80BQ9C086 356 aaPredicted RBP11.65□□□□□ -0.54
CPNE3-212ENST00000621783 FZD8Q9H461 694 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 METTL14Q9HCE5 456 aaKnown RBP11.65□□□□□ -0.54
CPNE3-212ENST00000621783 ARMCX3Q9UH62 379 aaPredicted RBP11.65□□□□□ -0.54
CPNE3-212ENST00000621783 FRMD4BQ9Y2L6 1034 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 KAT6AQ92794 2004 aa11.65□□□□□ -0.54
CPNE3-212ENST00000621783 CNTNAP2Q9UHC6 1331 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 A0A1W2PQ45 241 aaPredicted RBP11.64□□□□□ -0.55
CPNE3-212ENST00000621783 A0A1W2PQY0 241 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 B4GALT5O43286 388 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 GPR32O75388 356 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 MYCP01106 439 aaPredicted RBP11.64□□□□□ -0.55
CPNE3-212ENST00000621783 ADRB2P07550 413 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 IQCF3P0C7M6 154 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 HSPA1AP0DMV8 641 aaKnown RBP11.64□□□□□ -0.55
CPNE3-212ENST00000621783 HSPA1BP0DMV9 641 aaKnown RBP11.64□□□□□ -0.55
CPNE3-212ENST00000621783 PBX1P40424 430 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 UBXN1Q04323 297 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 ITGA7Q13683 1181 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 AMHR2Q16671 573 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 FAM187BQ17R55 369 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 KIZQ2M2Z5 673 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 DCAF17Q5H9S7 520 aaPredicted RBP11.64□□□□□ -0.55
CPNE3-212ENST00000621783 TAF2Q6P1X5 1199 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 ARRDC4Q8NCT1 418 aa11.64□□□□□ -0.55
CPNE3-212ENST00000621783 SAAL1Q96ER3 474 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms