RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MRPL48Q96GC5 212 aaKnown RBP7.6□□□□□ -1.19
COLCA1-205ENST00000620864 HPS5Q9UPZ3 1129 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 MROH5Q6ZUA9 1318 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 MAFGO15525 162 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 CIITAP33076 1130 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 CLK1P49759 484 aaKnown RBP7.6□□□□□ -1.19
COLCA1-205ENST00000620864 TFDP2Q14188 446 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 STAT4Q14765 748 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 TNNI3KQ59H18 835 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 UBE2Q1Q7Z7E8 422 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 DCLK2Q8N568 766 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 PCYOX1LQ8NBM8 494 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 PPP1R2P1Q96PQ5 205 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 UBE2OQ9C0C9 1292 aaKnown RBP7.6□□□□□ -1.19
COLCA1-205ENST00000620864 SUGCTQ9HAC7 445 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 TRPC7Q9HCX4 862 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 FPGT-TNNI3KV9GXZ4 949 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 MED23Q9ULK4 1368 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 PJA2O43164 708 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 AGTP01019 485 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 SLC4A1P02730 911 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 VHLP40337 213 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 RBL2Q08999 1139 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 KCTD2Q14681 263 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 IMPG1Q17R60 797 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 TMEM154Q6P9G4 183 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 ATOH1Q92858 354 aaPredicted RBP7.6□□□□□ -1.19
COLCA1-205ENST00000620864 MPP4Q96JB8 637 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 CLMNQ96JQ2 1002 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 TEKT3Q9BXF9 490 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 PCDHB4Q9Y5E5 795 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 EYA2O00167 538 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 BYSLQ13895 437 aaKnown RBP7.6□□□□□ -1.19
COLCA1-205ENST00000620864 TSC22D1Q15714 1073 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 KLHL12Q53G59 568 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 ARMC3Q5W041 872 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 FAM160B1Q5W0V3 765 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 CATSPER3Q86XQ3 398 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 ATP11CQ8NB49 1132 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 UHMK1Q8TAS1 419 aaKnown RBP7.6□□□□□ -1.19
COLCA1-205ENST00000620864 BLZF1Q9H2G9 400 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 UBN1Q9NPG3 1134 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 SMARCAL1Q9NZC9 954 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 SOX13Q9UN79 622 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 SMAPO00193 183 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 SLC12A1Q13621 1099 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 FASTKD5Q7L8L6 764 aaKnown RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 TAF1DQ9H5J8 278 aaPredicted RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 HACD3Q9P035 362 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 PYCARDQ9ULZ3 195 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 MRPL11Q9Y3B7 192 aaKnown RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 KPNA4O00629 521 aaPredicted RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 ZSCAN20P17040 1043 aaPredicted RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 ANXA13P27216 316 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 SOX5P35711 763 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 PDCLQ13371 301 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 ARID5BQ14865 1188 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 SLC39A14Q15043 492 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 OLFML1Q6UWY5 402 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 TTC39CQ8N584 583 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 EFHBQ8N7U6 833 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 OMA1Q96E52 524 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 FAM167BQ9BTA0 163 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 TBC1D7Q9P0N9 293 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 TBK1Q9UHD2 729 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 PFASO15067 1338 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 ALAS1P13196 640 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 KRT24Q2M2I5 525 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 EFL1Q7Z2Z2 1120 aaKnown RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 RIBC1Q8N443 379 aaPredicted RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 LRRC39Q96DD0 335 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 SGSM3Q96HU1 749 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 ACCSQ96QU6 501 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 METTL22Q9BUU2 404 aaPredicted RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 ADNPQ9H2P0 1102 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 ZBTB1Q9Y2K1 713 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 EPS8Q12929 822 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 OLFML2BQ68BL8 750 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 SHQ1Q6PI26 577 aaKnown RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 TPH2Q8IWU9 490 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 ARHGEF1Q92888 912 aaKnown RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 MRPL1Q9BYD6 325 aaKnown RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 PAPOLBQ9NRJ5 636 aaKnown RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 ATAD3AQ9NVI7 634 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 SELENONQ9NZV5 590 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 KANSL1LA0AUZ9 987 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 TRIM49P0CI25 452 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 TRIM49CP0CI26 452 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 GGCXP38435 758 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 RASGRF1Q13972 1273 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 MIGA2Q7L4E1 593 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 SPATA21Q7Z572 469 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 MICALL2Q8IY33 904 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 PCDHGB4Q9UN71 923 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 MTO1Q9Y2Z2 717 aaKnown RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 M0R2C6 588 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 TRIM24O15164 1050 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 SNUPNO95149 360 aaKnown RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 MYBL1P10243 752 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 CTSWP56202 376 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms