RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 GNPTABQ3T906 1256 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 BZW1Q7L1Q6 419 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 ARMC9Q7Z3E5 817 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 VSIG1Q86XK7 387 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 SYCE1Q8N0S2 351 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 MYCT1Q8N699 235 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 LNX1Q8TBB1 728 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 CALR3Q96L12 384 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 CEP63Q96MT8 703 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 REEP2Q9BRK0 252 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 GGA2Q9UJY4 613 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 DNAJC12Q9UKB3 198 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 TRPC6Q9Y210 931 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 USTQ9Y2C2 406 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 ALG6Q9Y672 507 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 PHLPP1O60346 1717 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 MYH3P11055 1940 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 C5orf60A6NFR6 353 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 FAM196BA6NMK8 535 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 RGL2O15211 777 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 DNAJC8O75937 253 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 CFBP00751 764 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 NR3C1P04150 777 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 NQO1P15559 274 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 PDIA5Q14554 519 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 KNOP1Q1ED39 458 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 LACTB2Q53H82 288 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 THEMIS2Q5TEJ8 643 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 CAPRIN2Q6IMN6 1127 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 ZNF449Q6P9G9 518 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 CCDC137Q6PK04 289 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 ADGRF4Q8IZF3 695 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 C1orf54Q8WWF1 131 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 ATXN2LQ8WWM7 1075 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 DCPSQ96C86 337 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 IMPG2Q9BZV3 1241 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 ETNK1Q9HBU6 452 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 NOP53Q9NZM5 478 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 SUCLA2Q9P2R7 463 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 USP54Q70EL1 1684 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 GLI3P10071 1580 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 CACNB3P54284 484 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 EIF3BP55884 814 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 LACTBP83111 547 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 SLFN13Q68D06 897 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 ZNF365Q70YC5 407 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 USP37Q86T82 979 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 SRRM1Q8IYB3 904 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 CYP2W1Q8TAV3 490 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 ZNF570Q96NI8 536 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 TMEM237Q96Q45 408 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 NAP1L4Q99733 375 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 SH2D3AQ9BRG2 576 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 EPB41L4BQ9H329 900 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 ROBO1Q9Y6N7 1651 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 PPFIA2O75334 1257 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 LGR5O75473 907 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 TAF11Q15544 211 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 KYNUQ16719 465 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 TLDC1Q6P9B6 456 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 EXOC3L1Q86VI1 746 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 CATSPER3Q86XQ3 398 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 SLC20A1Q8WUM9 679 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 TLCD1Q96CP7 247 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 PCIF1Q9H4Z3 704 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 DNM3Q9UQ16 869 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 BZW2Q9Y6E2 419 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 KIAA0391O15091 583 aaKnown RBP7.46□□□□□ -1.21
NEDD9-216ENST00000620854 SNX3O60493 162 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 FTLP02792 175 aaPredicted RBP7.46□□□□□ -1.21
NEDD9-216ENST00000620854 AKR1B1P15121 316 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 STX2P32856 288 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 PCK1P35558 622 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 MMP13P45452 471 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 NT5C2P49902 561 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 PDE6CP51160 858 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 NCALDP61601 193 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 SARNPP82979 210 aaKnown RBP7.46□□□□□ -1.21
NEDD9-216ENST00000620854 MAPK7Q13164 816 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 C6orf118Q5T5N4 469 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 DUPD1Q68J44 220 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 APBB1IPQ7Z5R6 666 aaPredicted RBP7.46□□□□□ -1.21
NEDD9-216ENST00000620854 FITM2Q8N6M3 262 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 HES6Q96HZ4 224 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 NT5C3AQ9H0P0 336 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 TDRD3Q9H7E2 651 aaKnown RBP7.46□□□□□ -1.21
NEDD9-216ENST00000620854 AS3MTQ9HBK9 375 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 COG5Q9UP83 839 aa7.46□□□□□ -1.21
NEDD9-216ENST00000620854 ABCB11O95342 1321 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 PHRF1Q9P1Y6 1649 aaKnown RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 PPP1R11O60927 126 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 ZBED4O75132 1171 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 SUN1O94901 812 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 TTLL1O95922 423 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 RARAP10276 462 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 PTENP60484 403 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 UBXN2AP68543 259 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 SATB1Q01826 763 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 KLRC3Q07444 240 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 SEMA3FQ13275 785 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms