RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 MYH11P35749 1972 aa20.16■□□□□ 0.82
LITAF-220ENST00000620789 EOMESO95936 686 aa20.16■□□□□ 0.82
LITAF-220ENST00000620789 PRKCBP05771 671 aa20.16■□□□□ 0.82
LITAF-220ENST00000620789 ATF7P17544 494 aaPredicted RBP20.16■□□□□ 0.82
LITAF-220ENST00000620789 ZNF131P52739 623 aa20.16■□□□□ 0.82
LITAF-220ENST00000620789 UBXN11Q5T124 520 aa20.16■□□□□ 0.82
LITAF-220ENST00000620789 ADALQ6DHV7 355 aa20.16■□□□□ 0.82
LITAF-220ENST00000620789 ZNF598Q86UK7 904 aaKnown RBP20.16■□□□□ 0.82
LITAF-220ENST00000620789 IQUBQ8NA54 791 aa20.16■□□□□ 0.82
LITAF-220ENST00000620789 CUEDC2Q9H467 287 aa20.16■□□□□ 0.82
LITAF-220ENST00000620789 MTMR10Q9NXD2 777 aa20.16■□□□□ 0.82
LITAF-220ENST00000620789 RBM19Q9Y4C8 960 aaKnown RBP20.16■□□□□ 0.82
LITAF-220ENST00000620789 PHLPP2Q6ZVD8 1323 aa20.16■□□□□ 0.82
LITAF-220ENST00000620789 MYMKA6NI61 221 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 K7ERI5 159 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 ACKR2O00590 384 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 SLC16A4O15374 487 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 HOXA2O43364 376 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 ZNF623O75123 536 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 TBCAO75347 108 aaKnown RBP20.15■□□□□ 0.82
LITAF-220ENST00000620789 FAM13AO94988 1023 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 FGFR1P11362 822 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 LIG1P18858 919 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 GATMP50440 423 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 SMTNP53814 917 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 PRPF4BQ13523 1007 aaKnown RBP20.15■□□□□ 0.82
LITAF-220ENST00000620789 BTG3Q14201 252 aaPredicted RBP20.15■□□□□ 0.82
LITAF-220ENST00000620789 GRIN2CQ14957 1233 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 CMTR2Q8IYT2 770 aaKnown RBP20.15■□□□□ 0.82
LITAF-220ENST00000620789 FIBCD1Q8N539 461 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 RNF169Q8NCN4 708 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 DDX12PQ92771 950 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 DHX58Q96C10 678 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 TMEM134Q9H6X4 195 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 PARVGQ9HBI0 331 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 PCDHB2Q9Y5E7 798 aa20.15■□□□□ 0.82
LITAF-220ENST00000620789 A0A1B0GUA9 196 aa20.14■□□□□ 0.81
LITAF-220ENST00000620789 POLR2DO15514 142 aaKnown RBP20.14■□□□□ 0.81
LITAF-220ENST00000620789 EDN1P05305 212 aa20.14■□□□□ 0.81
LITAF-220ENST00000620789 CMA1P23946 247 aa20.14■□□□□ 0.81
LITAF-220ENST00000620789 SLC27A1Q6PCB7 646 aa20.14■□□□□ 0.81
LITAF-220ENST00000620789 DYMQ7RTS9 669 aa20.14■□□□□ 0.81
LITAF-220ENST00000620789 SPRED2Q7Z698 418 aa20.14■□□□□ 0.81
LITAF-220ENST00000620789 MYCT1Q8N699 235 aa20.14■□□□□ 0.81
LITAF-220ENST00000620789 TGS1Q96RS0 853 aaKnown RBP20.14■□□□□ 0.81
LITAF-220ENST00000620789 TNMDQ9H2S6 317 aa20.14■□□□□ 0.81
LITAF-220ENST00000620789 GDPD2Q9HCC8 539 aa20.14■□□□□ 0.81
LITAF-220ENST00000620789 RNF19AQ9NV58 838 aa20.14■□□□□ 0.81
LITAF-220ENST00000620789 FNDC1Q4ZHG4 1894 aaPredicted RBP20.13■□□□□ 0.81
LITAF-220ENST00000620789 TTLL13PA6NNM8 815 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 TBKBP1A7MCY6 615 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 NCKAP1LP55160 1127 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 ERVK-21P61565 698 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 PAN2Q504Q3 1202 aaKnown RBP20.13■□□□□ 0.81
LITAF-220ENST00000620789 TAS1R3Q7RTX0 852 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 MRPL10Q7Z7H8 261 aaKnown RBP20.13■□□□□ 0.81
LITAF-220ENST00000620789 CDR2LQ86X02 465 aaPredicted RBP20.13■□□□□ 0.81
LITAF-220ENST00000620789 TMEM161BQ8NDZ6 487 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 CNNM3Q8NE01 707 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 DNAJC19Q96DA6 116 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 PGBD4Q96DM1 585 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 GUCD1Q96NT3 240 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 PYM1Q9BRP8 204 aaKnown RBP20.13■□□□□ 0.81
LITAF-220ENST00000620789 EIF2AQ9BY44 585 aaKnown RBP20.13■□□□□ 0.81
LITAF-220ENST00000620789 TMEM117Q9H0C3 514 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 ZHX3Q9H4I2 956 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 CERS4Q9HA82 394 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 KBTBD4Q9NVX7 518 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 KCNH3Q9ULD8 1083 aa20.13■□□□□ 0.81
LITAF-220ENST00000620789 H0YCG3 227 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 N4BP3O15049 544 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 PFKFB1P16118 471 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 TMEM132AQ24JP5 1023 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 CLLU1OSQ5K130 101 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 ABI1Q8IZP0 508 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 SMG8Q8ND04 991 aaKnown RBP20.12■□□□□ 0.81
LITAF-220ENST00000620789 ARNTL2Q8WYA1 636 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 LPPQ93052 612 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 SAMD11Q96NU1 681 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 CASD1Q96PB1 797 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 CDX2Q99626 313 aaPredicted RBP20.12■□□□□ 0.81
LITAF-220ENST00000620789 C17orf80Q9BSJ5 609 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 TRIM6Q9C030 488 aaPredicted RBP20.12■□□□□ 0.81
LITAF-220ENST00000620789 LRRC27Q9C0I9 530 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 PRDM12Q9H4Q4 367 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 PDZD7Q9H5P4 517 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 MAGEF1Q9HAY2 307 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 CHMP5Q9NZZ3 219 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 MTUS1Q9ULD2 1270 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 USP20Q9Y2K6 914 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 IPPQ9Y573 584 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 TRANK1O15050 2925 aa20.12■□□□□ 0.81
LITAF-220ENST00000620789 A0A1B0GVL5 298 aa20.11■□□□□ 0.81
LITAF-220ENST00000620789 A0A1W2PQ27 194 aa20.11■□□□□ 0.81
LITAF-220ENST00000620789 A0A1W2PQ64 194 aa20.11■□□□□ 0.81
LITAF-220ENST00000620789 A0A1W2PQD8 194 aa20.11■□□□□ 0.81
LITAF-220ENST00000620789 TRAK2O60296 914 aa20.11■□□□□ 0.81
LITAF-220ENST00000620789 LINC00271P0C7V0 271 aa20.11■□□□□ 0.81
LITAF-220ENST00000620789 MAPTP10636 758 aaKnown RBP20.11■□□□□ 0.81
LITAF-220ENST00000620789 LONRF3Q496Y0 759 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms