RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 SMIM10L2AP0DMW4 78 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 SMIM10L2BP0DMW5 78 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 EPB41P11171 864 aaKnown RBP16.61■□□□□ 0.25
COPS7B-224ENST00000620578 HOXD8P13378 290 aaPredicted RBP16.61■□□□□ 0.25
COPS7B-224ENST00000620578 PSMC2P35998 433 aaKnown RBP16.61■□□□□ 0.25
COPS7B-224ENST00000620578 KIF22Q14807 665 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 CBWD6Q4V339 395 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 CBWD3Q5JTY5 395 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 CBWD5Q5RIA9 395 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 MFSD14CQ5VZR4 134 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 GJB7Q6PEY0 223 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 RUFY4Q6ZNE9 571 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 PPFIBP1Q86W92 1011 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 TMEM139Q8IV31 216 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 INO80BQ9C086 356 aaPredicted RBP16.61■□□□□ 0.25
COPS7B-224ENST00000620578 C17orf75Q9HAS0 396 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 NLRC4Q9NPP4 1024 aa16.61■□□□□ 0.25
COPS7B-224ENST00000620578 TOPORSQ9NS56 1045 aaPredicted RBP16.61■□□□□ 0.25
COPS7B-224ENST00000620578 ZNF215Q9UL58 517 aaPredicted RBP16.61■□□□□ 0.25
COPS7B-224ENST00000620578 TREHO43280 583 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 TRIM21P19474 475 aaKnown RBP16.6■□□□□ 0.25
COPS7B-224ENST00000620578 IER5Q5VY09 327 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 E4F1Q66K89 784 aaPredicted RBP16.6■□□□□ 0.25
COPS7B-224ENST00000620578 FAM213AQ9BRX8 229 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 FRMD4BQ9Y2L6 1034 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 FAM170AA1A519 330 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 AKR1B15C9JRZ8 316 aaPredicted RBP16.6■□□□□ 0.25
COPS7B-224ENST00000620578 F2P00734 622 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 MSNP26038 577 aaKnown RBP16.6■□□□□ 0.25
COPS7B-224ENST00000620578 KRT9P35527 623 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 LIG4P49917 911 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 MARSP56192 900 aaKnown RBP16.6■□□□□ 0.25
COPS7B-224ENST00000620578 RTP1P59025 263 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 KIZQ2M2Z5 673 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 FKBP15Q5T1M5 1219 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 FRMD5Q7Z6J6 570 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 IFT122Q9HBG6 1241 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 HDAC6Q9UBN7 1215 aa16.6■□□□□ 0.25
COPS7B-224ENST00000620578 A0A0U1RQJ8 604 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 SOWAHDA6NJG2 315 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 PPP3CAQ08209 521 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 MFSD10Q14728 455 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 C1orf220Q5T0J3 134 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 KIAA0319LQ8IZA0 1049 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 XXYLT1Q8NBI6 393 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 KIAA1524Q8TCG1 905 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 ATRIPQ8WXE1 791 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 CHP1Q99653 195 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 MSCO60682 206 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 MFAP3LO75121 409 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 NOL4O94818 638 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 TPM2P07951 284 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 MATR3P43243 847 aaKnown RBP eCLIP16.59■□□□□ 0.25
COPS7B-224ENST00000620578 GCLMP48507 274 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 GSDMDP57764 484 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 NLRP11P59045 1033 aaKnown RBP16.59■□□□□ 0.25
COPS7B-224ENST00000620578 OSTNP61366 133 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 PURAQ00577 322 aaKnown RBP16.59■□□□□ 0.25
COPS7B-224ENST00000620578 ZNF484Q5JVG2 852 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 FOXR2Q6PJQ5 311 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 RAET1EQ8TD07 263 aa16.59■□□□□ 0.25
COPS7B-224ENST00000620578 UBE4BO95155 1302 aa16.58■□□□□ 0.25
COPS7B-224ENST00000620578 GNA14O95837 355 aa16.58■□□□□ 0.25
COPS7B-224ENST00000620578 TNFSF9P41273 254 aa16.58■□□□□ 0.25
COPS7B-224ENST00000620578 STRN3Q13033 797 aa16.58■□□□□ 0.25
COPS7B-224ENST00000620578 SNRNP35Q16560 246 aaKnown RBP16.58■□□□□ 0.25
COPS7B-224ENST00000620578 NFRKBQ6P4R8 1299 aa16.58■□□□□ 0.25
COPS7B-224ENST00000620578 CEP120Q8N960 986 aa16.58■□□□□ 0.25
COPS7B-224ENST00000620578 ERGIC2Q96RQ1 377 aa16.58■□□□□ 0.25
COPS7B-224ENST00000620578 DESI2Q9BSY9 194 aa16.58■□□□□ 0.25
COPS7B-224ENST00000620578 TTYH3Q9C0H2 523 aa16.58■□□□□ 0.25
COPS7B-224ENST00000620578 AJAP1Q9UKB5 411 aaPredicted RBP16.58■□□□□ 0.25
COPS7B-224ENST00000620578 DUSP11O75319 330 aaKnown RBP16.58■□□□□ 0.24
COPS7B-224ENST00000620578 PNMA6AP0CW24 399 aaPredicted RBP16.58■□□□□ 0.24
COPS7B-224ENST00000620578 PSEN2P49810 448 aa16.58■□□□□ 0.24
COPS7B-224ENST00000620578 LINC01465Q8N7H1 131 aa16.58■□□□□ 0.24
COPS7B-224ENST00000620578 SH3TC2Q8TF17 1288 aa16.58■□□□□ 0.24
COPS7B-224ENST00000620578 CPB2Q96IY4 423 aa16.58■□□□□ 0.24
COPS7B-224ENST00000620578 LSM14BQ9BX40 385 aaKnown RBP16.58■□□□□ 0.24
COPS7B-224ENST00000620578 A0A1W2PQC6 194 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 SEPT4O43236 478 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 AFPP02771 609 aaKnown RBP16.57■□□□□ 0.24
COPS7B-224ENST00000620578 DLATP10515 647 aaKnown RBP16.57■□□□□ 0.24
COPS7B-224ENST00000620578 CPT1AP50416 773 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 BFSP1Q12934 665 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 ALCAMQ13740 583 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 ENOX2Q16206 610 aaKnown RBP16.57■□□□□ 0.24
COPS7B-224ENST00000620578 EEF1DP3Q658K8 133 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 DNAJB3Q8WWF6 145 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 TCHPQ9BT92 498 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 PLEKP08567 350 aaPredicted RBP16.57■□□□□ 0.24
COPS7B-224ENST00000620578 MXD4Q14582 209 aaPredicted RBP16.57■□□□□ 0.24
COPS7B-224ENST00000620578 PPP2R5AQ15172 486 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 BRDTQ58F21 947 aaPredicted RBP16.57■□□□□ 0.24
COPS7B-224ENST00000620578 TMEM192Q8IY95 271 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 NLRP7Q8WX94 980 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 SCLT1Q96NL6 688 aa16.57■□□□□ 0.24
COPS7B-224ENST00000620578 BAG1Q99933 345 aaPredicted RBP16.57■□□□□ 0.24
COPS7B-224ENST00000620578 CCDC113Q9H0I3 377 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms