RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 RAB34Q9BZG1 259 aa27.99■■■□□ 2.07
VEGFA-228ENST00000617771 TBC1D13Q9NVG8 400 aa27.99■■■□□ 2.07
VEGFA-228ENST00000617771 PRKAG3Q9UGI9 489 aa27.99■■■□□ 2.07
VEGFA-228ENST00000617771 STK24Q9Y6E0 443 aa27.99■■■□□ 2.07
VEGFA-228ENST00000617771 ZC3H11AO75152 810 aaKnown RBP eCLIP27.98■■■□□ 2.07
VEGFA-228ENST00000617771 MBTD1Q05BQ5 628 aa27.98■■■□□ 2.07
VEGFA-228ENST00000617771 UBXN11Q5T124 520 aa27.98■■■□□ 2.07
VEGFA-228ENST00000617771 GJD3Q8N144 294 aa27.98■■■□□ 2.07
VEGFA-228ENST00000617771 TMEM169Q96HH4 297 aa27.98■■■□□ 2.07
VEGFA-228ENST00000617771 RSAD1Q9HA92 442 aa27.98■■■□□ 2.07
VEGFA-228ENST00000617771 LRWD1Q9UFC0 647 aa27.98■■■□□ 2.07
VEGFA-228ENST00000617771 ARHGEF35A5YM69 484 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 PER2O15055 1255 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 MBTPS2O43462 519 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 CD2BP2O95400 341 aaKnown RBP27.97■■■□□ 2.07
VEGFA-228ENST00000617771 NCLP19338 710 aaKnown RBP27.97■■■□□ 2.07
VEGFA-228ENST00000617771 SSTR3P32745 418 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-228ENST00000617771 TOB1P50616 345 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-228ENST00000617771 BMS1Q14692 1282 aaKnown RBP27.97■■■□□ 2.07
VEGFA-228ENST00000617771 DUSP6Q16828 381 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 MCTP1Q6DN14 999 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 AGMOQ6ZNB7 445 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 MAEAQ7L5Y9 396 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 TMC7Q7Z402 723 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 MSLNLQ96KJ4 702 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 UBN1Q9NPG3 1134 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 PCDHB6Q9Y5E3 794 aa27.97■■■□□ 2.07
VEGFA-228ENST00000617771 LAD1O00515 517 aa27.96■■■□□ 2.07
VEGFA-228ENST00000617771 GJB2P29033 226 aa27.96■■■□□ 2.07
VEGFA-228ENST00000617771 CCT6AP40227 531 aaKnown RBP27.96■■■□□ 2.07
VEGFA-228ENST00000617771 PTGDRQ13258 359 aa27.96■■■□□ 2.07
VEGFA-228ENST00000617771 PDIA5Q14554 519 aa27.96■■■□□ 2.07
VEGFA-228ENST00000617771 SMAD2Q15796 467 aaKnown RBP27.96■■■□□ 2.07
VEGFA-228ENST00000617771 CPB2Q96IY4 423 aa27.96■■■□□ 2.07
VEGFA-228ENST00000617771 NRDE2Q9H7Z3 1164 aa27.96■■■□□ 2.07
VEGFA-228ENST00000617771 GPRC5CQ9NQ84 441 aa27.96■■■□□ 2.07
VEGFA-228ENST00000617771 CLEC1BQ9P126 229 aa27.96■■■□□ 2.07
VEGFA-228ENST00000617771 KANSL3Q9P2N6 904 aa27.96■■■□□ 2.07
VEGFA-228ENST00000617771 LRRIQ4A6NIV6 560 aa27.95■■■□□ 2.06
VEGFA-228ENST00000617771 NT5C1B-RDH14C9J2C7 533 aa27.95■■■□□ 2.06
VEGFA-228ENST00000617771 H3BQV1 296 aa27.95■■■□□ 2.06
VEGFA-228ENST00000617771 GLP2RO95838 553 aa27.95■■■□□ 2.06
VEGFA-228ENST00000617771 SRGAP2BP0DMP2 458 aa27.95■■■□□ 2.06
VEGFA-228ENST00000617771 SMC1AQ14683 1233 aaKnown RBP27.95■■■□□ 2.06
VEGFA-228ENST00000617771 PADI6Q6TGC4 694 aa27.95■■■□□ 2.06
VEGFA-228ENST00000617771 C1QTNF1Q9BXJ1 281 aa27.95■■■□□ 2.06
VEGFA-228ENST00000617771 CSRNP2Q9H175 543 aa27.95■■■□□ 2.06
VEGFA-228ENST00000617771 CD320Q9NPF0 282 aa27.95■■■□□ 2.06
VEGFA-228ENST00000617771 EYA4O95677 639 aa27.94■■■□□ 2.06
VEGFA-228ENST00000617771 ITGA4P13612 1032 aa27.94■■■□□ 2.06
VEGFA-228ENST00000617771 COASYQ13057 564 aa27.94■■■□□ 2.06
VEGFA-228ENST00000617771 AMHR2Q16671 573 aa27.94■■■□□ 2.06
VEGFA-228ENST00000617771 ADHFE1Q8IWW8 467 aa27.94■■■□□ 2.06
VEGFA-228ENST00000617771 HACE1Q8IYU2 909 aa27.94■■■□□ 2.06
VEGFA-228ENST00000617771 IGSF22Q8N9C0 903 aa27.94■■■□□ 2.06
VEGFA-228ENST00000617771 TRIM6Q9C030 488 aaPredicted RBP27.94■■■□□ 2.06
VEGFA-228ENST00000617771 GBP3Q9H0R5 595 aa27.94■■■□□ 2.06
VEGFA-228ENST00000617771 BARX2Q9UMQ3 279 aaPredicted RBP27.94■■■□□ 2.06
VEGFA-228ENST00000617771 SMC3Q9UQE7 1217 aa27.94■■■□□ 2.06
VEGFA-228ENST00000617771 IPPQ9Y573 584 aa27.94■■■□□ 2.06
VEGFA-228ENST00000617771 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.94■■■□□ 2.06
VEGFA-228ENST00000617771 GALTP07902 379 aa27.93■■■□□ 2.06
VEGFA-228ENST00000617771 ARF4P18085 180 aaPredicted RBP27.93■■■□□ 2.06
VEGFA-228ENST00000617771 CYP11B2P19099 503 aa27.93■■■□□ 2.06
VEGFA-228ENST00000617771 PRPHP41219 470 aa27.93■■■□□ 2.06
VEGFA-228ENST00000617771 ZP2Q05996 745 aa27.93■■■□□ 2.06
VEGFA-228ENST00000617771 RILPL1Q5EBL4 403 aa27.93■■■□□ 2.06
VEGFA-228ENST00000617771 ZBTB8OSQ8IWT0 167 aa27.93■■■□□ 2.06
VEGFA-228ENST00000617771 SMRP1Q8NCR6 262 aa27.93■■■□□ 2.06
VEGFA-228ENST00000617771 SMG8Q8ND04 991 aaKnown RBP27.93■■■□□ 2.06
VEGFA-228ENST00000617771 FAM193BQ96PV7 902 aaPredicted RBP27.93■■■□□ 2.06
VEGFA-228ENST00000617771 EIF2AQ9BY44 585 aaKnown RBP27.93■■■□□ 2.06
VEGFA-228ENST00000617771 HIDE1A8MVS5 230 aa27.92■■■□□ 2.06
VEGFA-228ENST00000617771 SNX29Q8TEQ0 813 aa27.92■■■□□ 2.06
VEGFA-228ENST00000617771 IGSF21Q96ID5 467 aa27.92■■■□□ 2.06
VEGFA-228ENST00000617771 PRIMPOLQ96LW4 560 aa27.92■■■□□ 2.06
VEGFA-228ENST00000617771 POP1Q99575 1024 aaKnown RBP27.92■■■□□ 2.06
VEGFA-228ENST00000617771 C2orf40Q9H1Z8 148 aa27.92■■■□□ 2.06
VEGFA-228ENST00000617771 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.92■■■□□ 2.06
VEGFA-228ENST00000617771 PRMT7Q9NVM4 692 aaPredicted RBP27.92■■■□□ 2.06
VEGFA-228ENST00000617771 KIAA1024Q9UPX6 916 aa27.92■■■□□ 2.06
VEGFA-228ENST00000617771 ECM1Q16610 540 aa27.91■■■□□ 2.06
VEGFA-228ENST00000617771 KRT79Q5XKE5 535 aa27.91■■■□□ 2.06
VEGFA-228ENST00000617771 CDCA2Q69YH5 1023 aaPredicted RBP27.91■■■□□ 2.06
VEGFA-228ENST00000617771 DTHD1Q6ZMT9 781 aa27.91■■■□□ 2.06
VEGFA-228ENST00000617771 ZNF280BQ86YH2 543 aa27.91■■■□□ 2.06
VEGFA-228ENST00000617771 MRPL43Q8N983 215 aaKnown RBP27.91■■■□□ 2.06
VEGFA-228ENST00000617771 DNAJB4Q9UDY4 337 aa27.91■■■□□ 2.06
VEGFA-228ENST00000617771 STK39Q9UEW8 545 aa27.91■■■□□ 2.06
VEGFA-228ENST00000617771 POMCP01189 267 aa27.9■■■□□ 2.06
VEGFA-228ENST00000617771 CA8P35219 290 aa27.9■■■□□ 2.06
VEGFA-228ENST00000617771 SLC11A1P49279 550 aa27.9■■■□□ 2.06
VEGFA-228ENST00000617771 SLC27A1Q6PCB7 646 aa27.9■■■□□ 2.06
VEGFA-228ENST00000617771 TMEM184AQ6ZMB5 413 aa27.9■■■□□ 2.06
VEGFA-228ENST00000617771 PPP4R3CPQ6ZMV5 832 aa27.9■■■□□ 2.06
VEGFA-228ENST00000617771 DDX53Q86TM3 631 aaKnown RBP27.9■■■□□ 2.06
VEGFA-228ENST00000617771 TMEM173Q86WV6 379 aaPredicted RBP27.9■■■□□ 2.06
VEGFA-228ENST00000617771 VPS52Q8N1B4 723 aa27.9■■■□□ 2.06
VEGFA-228ENST00000617771 VN1R2Q8NFZ6 395 aa27.9■■■□□ 2.06
VEGFA-228ENST00000617771 TMEM175Q9BSA9 504 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms