RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 CSPG5O95196 566 aa24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 PBX3P40426 434 aa24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 ALDH7A1P49419 539 aaKnown RBP24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 COASYQ13057 564 aa24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 SMAD4Q13485 552 aaKnown RBP24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 TMEM184AQ6ZMB5 413 aa24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 IGSF22Q8N9C0 903 aa24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 MICAL1Q8TDZ2 1067 aa24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 NRDE2Q9H7Z3 1164 aa24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 CD207Q9UJ71 328 aa24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 PCDHB6Q9Y5E3 794 aa24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 STK24Q9Y6E0 443 aa24.83■■□□□ 1.57
ARHGEF1-223ENST00000617585 INPPL1O15357 1258 aa24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 USO1O60763 962 aaKnown RBP24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 PTGDRQ13258 359 aa24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 NBR1Q14596 966 aa24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 NOTUMQ6P988 496 aa24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 POTEGQ6S5H5 508 aa24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 GJD3Q8N144 294 aa24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 SMG8Q8ND04 991 aaKnown RBP24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 POLR3FQ9H1D9 316 aaPredicted RBP24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 UBN1Q9NPG3 1134 aa24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.82■■□□□ 1.56
ARHGEF1-223ENST00000617585 C19orf67A6NJJ6 358 aa24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 INO80B-WBP1J3KQ70 363 aa24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 PRPHP41219 470 aa24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 NDUFV1P49821 464 aa24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 CDCA2Q69YH5 1023 aaPredicted RBP24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 RBM23Q86U06 439 aaKnown RBP24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 SMRP1Q8NCR6 262 aa24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 TCF25Q9BQ70 676 aa24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 CSRNP2Q9H175 543 aa24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 RSAD1Q9HA92 442 aa24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 KANSL3Q9P2N6 904 aa24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 LRWD1Q9UFC0 647 aa24.81■■□□□ 1.56
ARHGEF1-223ENST00000617585 TDRD15B5MCY1 1934 aaKnown RBP24.8■■□□□ 1.56
ARHGEF1-223ENST00000617585 GALTP07902 379 aa24.8■■□□□ 1.56
ARHGEF1-223ENST00000617585 ARF4P18085 180 aaPredicted RBP24.8■■□□□ 1.56
ARHGEF1-223ENST00000617585 CYP11B2P19099 503 aa24.8■■□□□ 1.56
ARHGEF1-223ENST00000617585 ZP2Q05996 745 aa24.8■■□□□ 1.56
ARHGEF1-223ENST00000617585 NCBP1Q09161 790 aaKnown RBP24.8■■□□□ 1.56
ARHGEF1-223ENST00000617585 ECM1Q16610 540 aa24.8■■□□□ 1.56
ARHGEF1-223ENST00000617585 PPP4R3CPQ6ZMV5 832 aa24.8■■□□□ 1.56
ARHGEF1-223ENST00000617585 ADHFE1Q8IWW8 467 aa24.8■■□□□ 1.56
ARHGEF1-223ENST00000617585 GPRC5CQ9NQ84 441 aa24.8■■□□□ 1.56
ARHGEF1-223ENST00000617585 PER2O15055 1255 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 GJB2P29033 226 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 FAM187BQ17R55 369 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 LONRF3Q496Y0 759 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 RILPL1Q5EBL4 403 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 PLPP4Q5VZY2 271 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 PADI6Q6TGC4 694 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 MRPL43Q8N983 215 aaKnown RBP24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 VN1R2Q8NFZ6 395 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 URGCPQ8TCY9 931 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 KHSRPQ92945 711 aaKnown RBP eCLIP24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 TMEM169Q96HH4 297 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 IGSF21Q96ID5 467 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 PRIMPOLQ96LW4 560 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 C1QTNF1Q9BXJ1 281 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 EIF2AQ9BY44 585 aaKnown RBP24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 RAB34Q9BZG1 259 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 ENTPD7Q9NQZ7 604 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 IPPQ9Y573 584 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 IRAK3Q9Y616 596 aa24.79■■□□□ 1.56
ARHGEF1-223ENST00000617585 A0A1B0GUA9 196 aa24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 HIDE1A8MVS5 230 aa24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 NT5C1B-RDH14C9J2C7 533 aa24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 ZC3H11AO75152 810 aaKnown RBP eCLIP24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 AFF1P51825 1210 aaKnown RBP24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 TMC7Q7Z402 723 aa24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 DDX53Q86TM3 631 aaKnown RBP24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 TMEM173Q86WV6 379 aaPredicted RBP24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 ZNF280BQ86YH2 543 aa24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 TMEM175Q9BSA9 504 aa24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 FZD8Q9H461 694 aa24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 DAXXQ9UER7 740 aaPredicted RBP24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 INPP5FQ9Y2H2 1132 aa24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 ZMYM2Q9UBW7 1377 aa24.78■■□□□ 1.56
ARHGEF1-223ENST00000617585 ARHGEF35A5YM69 484 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 PI4K2BG5E9Z4 385 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 B4GALT3O60512 393 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 DDHD2O94830 711 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 ITGA4P13612 1032 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 CCT6AP40227 531 aaKnown RBP24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 RNASELQ05823 741 aaKnown RBP24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 SMC1AQ14683 1233 aaKnown RBP24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 CLUL1Q15846 466 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 IL17AQ16552 155 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 CPB2Q96IY4 423 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 ZBP1Q9H171 429 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 PRMT7Q9NVM4 692 aaPredicted RBP24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 DNAJB4Q9UDY4 337 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 STK39Q9UEW8 545 aa24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 BARX2Q9UMQ3 279 aaPredicted RBP24.77■■□□□ 1.56
ARHGEF1-223ENST00000617585 C2orf71A6NGG8 1288 aa24.76■■□□□ 1.55
ARHGEF1-223ENST00000617585 SLC11A1P49279 550 aa24.76■■□□□ 1.55
ARHGEF1-223ENST00000617585 SLC27A1Q6PCB7 646 aa24.76■■□□□ 1.55
ARHGEF1-223ENST00000617585 MAEAQ7L5Y9 396 aa24.76■■□□□ 1.55
ARHGEF1-223ENST00000617585 C2orf40Q9H1Z8 148 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms