RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 CNTNAP2Q9UHC6 1331 aa17.11■□□□□ 0.33
SRGAP2C-205ENST00000617209 MYH11P35749 1972 aa17.11■□□□□ 0.33
SRGAP2C-205ENST00000617209 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 MYH15Q9Y2K3 1946 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 OFD1O75665 1012 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 ITGB1P05556 798 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 SLC12A3P55017 1021 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 GRIN1Q05586 938 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 CAMK1Q14012 370 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 TIGD5Q53EQ6 642 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 GLB1LQ6UWU2 654 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 AGMOQ6ZNB7 445 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 DAW1Q8N136 415 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 MICALL1Q8N3F8 863 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 COLGALT1Q8NBJ5 622 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 CALML4Q96GE6 196 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 DRC1Q96MC2 740 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 CCDC113Q9H0I3 377 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 ALG13Q9NP73 1137 aaKnown RBP17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 THEGQ9P2T0 379 aa17.1■□□□□ 0.33
SRGAP2C-205ENST00000617209 ATG2AQ2TAZ0 1938 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 ACKR2O00590 384 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 NASPP49321 788 aaPredicted RBP17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 PLCB3Q01970 1234 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 MAPK7Q13164 816 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 ZRSR1Q15695 479 aaKnown RBP17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 MAPK6Q16659 721 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 SPOUT1Q5T280 376 aaKnown RBP17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 SLC27A1Q6PCB7 646 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 SMG8Q8ND04 991 aaKnown RBP17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 DEPTORQ8TB45 409 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 LPPQ93052 612 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 USP28Q96RU2 1077 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 RUSC1Q9BVN2 902 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 PRDM6Q9NQX0 595 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 KANSL3Q9P2N6 904 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 FBXO2Q9UK22 296 aaPredicted RBP17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 LZTS1Q9Y250 596 aa17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 RBM19Q9Y4C8 960 aaKnown RBP17.09■□□□□ 0.33
SRGAP2C-205ENST00000617209 PHLPP2Q6ZVD8 1323 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 MEIS3P2A8K0S8 358 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 INPPL1O15357 1258 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 HIP1RO75146 1068 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 FGF18O76093 207 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 PLA2G4BP0C869 781 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 PPM1AP35813 382 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 COL19A1Q14993 1142 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 NOMO2Q5JPE7 1267 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 KCNT2Q6UVM3 1135 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 CPB2Q96IY4 423 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 ZNF396Q96N95 335 aaPredicted RBP17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 ZNF558Q96NG5 402 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 NSUN3Q9H649 340 aaKnown RBP17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 RSAD1Q9HA92 442 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 POLD4Q9HCU8 107 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 HCSTQ9UBK5 93 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 IPPQ9Y573 584 aa17.08■□□□□ 0.32
SRGAP2C-205ENST00000617209 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 K7ERI5 159 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 B4GALT5O43286 388 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 NCK2O43639 380 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 ITGA4P13612 1032 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 DNAJB1P25685 340 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 MARCKSP29966 332 aaPredicted RBP17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 NPTX2P47972 431 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 PRPF4BQ13523 1007 aaKnown RBP17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 AAK1Q2M2I8 961 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 ARSHQ5FYA8 562 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 PDE12Q6L8Q7 609 aaKnown RBP17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 POF1BQ8WVV4 589 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 SPIRE2Q8WWL2 714 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 HLA-CQ95604 372 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 PLIN2Q99541 437 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 TMEM134Q9H6X4 195 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 BLOC1S4Q9NUP1 217 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 TBC1D13Q9NVG8 400 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 SPG21Q9NZD8 308 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 GIT1Q9Y2X7 761 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 CUL9Q8IWT3 2517 aa17.07■□□□□ 0.32
SRGAP2C-205ENST00000617209 ZMYM2Q9UBW7 1377 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 PRKCBP05771 671 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 DDIT3P35638 169 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 ALDH7A1P49419 539 aaKnown RBP17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 PEX3P56589 373 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 MRPS5P82675 430 aaKnown RBP17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 CEBPZQ03701 1054 aaKnown RBP17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 DMP1Q13316 513 aaPredicted RBP17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 SKIV2LQ15477 1246 aaKnown RBP17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 LONRF3Q496Y0 759 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 ATL3Q6DD88 541 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 THNSL1Q8IYQ7 743 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 HACE1Q8IYU2 909 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 LINC00301Q8NCQ3 95 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 URGCPQ8TCY9 931 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 KCNN1Q92952 543 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 EPSTI1Q96J88 318 aa17.06■□□□□ 0.32
SRGAP2C-205ENST00000617209 ASB2Q96Q27 587 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms