RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SLC12A3P55017 1021 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 RBM46Q8TBY0 533 aaKnown RBP14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 GBP1P32455 592 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 BACE1P56817 501 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 ECM1Q16610 540 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 TATDN1Q6P1N9 297 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 DNAAF5Q86Y56 855 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 RHPN2Q8IUC4 686 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 TCP11Q8WWU5 503 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 NLRP7Q8WX94 980 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 FAM167AQ96KS9 214 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 CBWD1Q9BRT8 395 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 HESX1Q9UBX0 185 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 RPF1Q9H9Y2 349 aaKnown RBP14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 OLFML3Q9NRN5 406 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 PLAAQ9Y263 795 aa14.17□□□□□ -0.14
PPP4R3B-206ENST00000616407 SART1O43290 800 aaKnown RBP14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 PPFIA4O75335 1185 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 GGPS1O95749 300 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 SLCO1A2P46721 670 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 CASP5P51878 434 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 KCNA1Q09470 495 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 MED15Q96RN5 788 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 HEMGNQ9BXL5 484 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 ANKEF1Q9NU02 776 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 DIS3Q9Y2L1 958 aaKnown RBP14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 SYNGAP1Q96PV0 1343 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 MAFGO15525 162 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 VIL1P09327 827 aaKnown RBP14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 SSTR3P32745 418 aaPredicted RBP14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 PAPD7Q5XG87 772 aaKnown RBP14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 TMEM139Q8IV31 216 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 SLC30A5Q8TAD4 765 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 RUNDC3BQ96NL0 473 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 PDCD2LQ9BRP1 358 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 NOVA2Q9UNW9 492 aaKnown RBP14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 TRAF3IP3Q9Y228 551 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 NOD1Q9Y239 953 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 UBE4BO95155 1302 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 ANXA13P27216 316 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 SLC35G1Q2M3R5 365 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 MIIPQ5JXC2 388 aa14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 RIN2Q8WYP3 895 aaPredicted RBP14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 RNPC3Q96LT9 517 aaKnown RBP14.16□□□□□ -0.14
PPP4R3B-206ENST00000616407 EPHB6O15197 1021 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 PBX1P40424 430 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 ARHGAP25P42331 645 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 MEA1Q16626 185 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 RSRC2Q7L4I2 434 aaKnown RBP14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 DNAJC17Q9NVM6 304 aaKnown RBP14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 CHORDC1Q9UHD1 332 aaPredicted RBP14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 LRRD1A4D1F6 860 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 FOXN3O00409 490 aaPredicted RBP14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 KRT1P04264 644 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 SURF1Q15526 300 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 ZNF568Q3ZCX4 644 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 WDR59Q6PJI9 974 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 LRRC55Q6ZSA7 311 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 CCDC63Q8NA47 563 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 PSMD1Q99460 953 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 TAF1DQ9H5J8 278 aaPredicted RBP14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 SIK3Q9Y2K2 1263 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 NR1D1P20393 614 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 DYNLT1P63172 113 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 ZBTB16Q05516 673 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 KRT81Q14533 505 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 FAM47CQ5HY64 1035 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 RNF149Q8NC42 400 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 SPATA33Q96N06 139 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 HOMER3Q9NSC5 361 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 CYP3A7-CYP3A51PA0A087WV96 503 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 DAPK3O43293 454 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 RTN2O75298 545 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 MUTP22033 750 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 CYP3A7P24462 503 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 CIITAP33076 1130 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 HNRNPH2P55795 449 aaKnown RBP14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 TGFB2P61812 414 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 PPP1R21Q6ZMI0 780 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 ZNF571Q7Z3V5 609 aaPredicted RBP14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 ERICH1Q86X53 443 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 SLC5A5Q92911 643 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 MTMR8Q96EF0 704 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 FUT8Q9BYC5 575 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 KIAA1683Q9H0B3 1180 aa14.15□□□□□ -0.14
PPP4R3B-206ENST00000616407 ZRANB2O95218 330 aaKnown RBP eCLIP14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 ABL1P00519 1130 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 MAN1A1P33908 653 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 PLA2G4AP47712 749 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 CYP4F22Q6NT55 531 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 SH3BP5LQ7L8J4 393 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 CBWD2Q8IUF1 395 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 FAM49AQ9H0Q0 323 aaPredicted RBP14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 ANAPC5Q9UJX4 755 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 TMEM150BA6NC51 233 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 CYP3A4P08684 503 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 GNA15P30679 374 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 IFNAR2P48551 515 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 ACTR2P61160 394 aa14.14□□□□□ -0.15
PPP4R3B-206ENST00000616407 EMC2Q15006 297 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms