RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 MXD4Q14582 209 aaPredicted RBP16.5■□□□□ 0.23
PRKN-211ENST00000615065 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
PRKN-211ENST00000615065 SYCE2Q6PIF2 218 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 MRPL10Q7Z7H8 261 aaKnown RBP16.5■□□□□ 0.23
PRKN-211ENST00000615065 ZNF280BQ86YH2 543 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 VPS52Q8N1B4 723 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 ASAP3Q8TDY4 903 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 PIGOQ8TEQ8 1089 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 AUTS2Q8WXX7 1259 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 IGSF21Q96ID5 467 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 C8orf76Q96K31 380 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 PHF7Q9BWX1 381 aaPredicted RBP16.5■□□□□ 0.23
PRKN-211ENST00000615065 ZBP1Q9H171 429 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 S1PR5Q9H228 398 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 RSAD1Q9HA92 442 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 TDRD15B5MCY1 1934 aaKnown RBP16.5■□□□□ 0.23
PRKN-211ENST00000615065 TSPAN1O60635 241 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 CLASP2O75122 1294 aaKnown RBP16.49■□□□□ 0.23
PRKN-211ENST00000615065 DGAT1O75907 488 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 SLC11A1P49279 550 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 CAPSQ13938 189 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 SAFBQ15424 915 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRKN-211ENST00000615065 URGCPQ8TCY9 931 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 CPB2Q96IY4 423 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 RPGRIP1Q96KN7 1286 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 CCDC43Q96MW1 224 aaKnown RBP16.49■□□□□ 0.23
PRKN-211ENST00000615065 KIF2CQ99661 725 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 VN1R3Q9BXE9 311 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 EIF2AQ9BY44 585 aaKnown RBP16.49■□□□□ 0.23
PRKN-211ENST00000615065 CDH22Q9UJ99 828 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 HCFC2Q9Y5Z7 792 aa16.49■□□□□ 0.23
PRKN-211ENST00000615065 CNTNAP2Q9UHC6 1331 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.48■□□□□ 0.23
PRKN-211ENST00000615065 USO1O60763 962 aaKnown RBP16.48■□□□□ 0.23
PRKN-211ENST00000615065 DDHD2O94830 711 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 CXCL14O95715 111 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 SPATA31C1P0DKV0 1188 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 NCLP19338 710 aaKnown RBP16.48■□□□□ 0.23
PRKN-211ENST00000615065 GLRA2P23416 452 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 ARL2P36404 184 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 MBTD1Q05BQ5 628 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 TFDP1Q14186 410 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 CBX2Q14781 532 aaPredicted RBP16.48■□□□□ 0.23
PRKN-211ENST00000615065 DDX53Q86TM3 631 aaKnown RBP16.48■□□□□ 0.23
PRKN-211ENST00000615065 IFNLR1Q8IU57 520 aaPredicted RBP16.48■□□□□ 0.23
PRKN-211ENST00000615065 SMG8Q8ND04 991 aaKnown RBP16.48■□□□□ 0.23
PRKN-211ENST00000615065 CASP10Q92851 521 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 FAM122AQ96E09 287 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
PRKN-211ENST00000615065 POLR3FQ9H1D9 316 aaPredicted RBP16.48■□□□□ 0.23
PRKN-211ENST00000615065 IPPQ9Y573 584 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 TECTAO75443 2155 aa16.48■□□□□ 0.23
PRKN-211ENST00000615065 CARNS1A5YM72 827 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 INO80B-WBP1J3KQ70 363 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 MED24O75448 989 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 POMCP01189 267 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 CTSAP10619 480 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 HOXB8P17481 243 aaPredicted RBP16.47■□□□□ 0.23
PRKN-211ENST00000615065 BMS1Q14692 1282 aaKnown RBP16.47■□□□□ 0.23
PRKN-211ENST00000615065 PCBP1Q15365 356 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRKN-211ENST00000615065 ZNF174Q15697 407 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 AMHR2Q16671 573 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 C8orf34Q49A92 452 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 NOTUMQ6P988 496 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 ARIH1Q9Y4X5 557 aaPredicted RBP16.47■□□□□ 0.23
PRKN-211ENST00000615065 HES2Q9Y543 173 aa16.47■□□□□ 0.23
PRKN-211ENST00000615065 ITGA4P13612 1032 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 ARF4P18085 180 aaPredicted RBP16.46■□□□□ 0.23
PRKN-211ENST00000615065 SP100P23497 879 aaPredicted RBP16.46■□□□□ 0.23
PRKN-211ENST00000615065 AXLP30530 894 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 POU5F1BQ06416 359 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 HFE2Q6ZVN8 426 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 MAEAQ7L5Y9 396 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 CATSPER3Q86XQ3 398 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 FBXO18Q8NFZ0 1043 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 CCDC51Q96ER9 411 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 CSRNP2Q9H175 543 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 FOXP1Q9H334 677 aaPredicted RBP16.46■□□□□ 0.23
PRKN-211ENST00000615065 TUFT1Q9NNX1 390 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 GPRC5CQ9NQ84 441 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 KANSL3Q9P2N6 904 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 IRAK3Q9Y616 596 aa16.46■□□□□ 0.23
PRKN-211ENST00000615065 B4GALT5O43286 388 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
PRKN-211ENST00000615065 OR52Z1P0C646 297 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 XRCC6P12956 609 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRKN-211ENST00000615065 EPCAMP16422 314 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 MLH1P40692 756 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 HMGN5P82970 282 aaKnown RBP16.45■□□□□ 0.22
PRKN-211ENST00000615065 PTPN14Q15678 1187 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 TPRNQ4KMQ1 711 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 POTEGQ6S5H5 508 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 CDR2LQ86X02 465 aaPredicted RBP16.45■□□□□ 0.22
PRKN-211ENST00000615065 CNNM3Q8NE01 707 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 EDAQ92838 391 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 ZSCAN31Q96LW9 406 aaPredicted RBP16.45■□□□□ 0.22
PRKN-211ENST00000615065 FAM193BQ96PV7 902 aaPredicted RBP16.45■□□□□ 0.22
PRKN-211ENST00000615065 GAD1Q99259 594 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 TMEM175Q9BSA9 504 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms