RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 KLRC4O43908 158 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 TOMM70O94826 608 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 ATG7O95352 703 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 MCCD1P59942 119 aaPredicted RBP9.53□□□□□ -0.88
VPS11-206ENST00000614944 KARSQ15046 597 aaKnown RBP9.53□□□□□ -0.88
VPS11-206ENST00000614944 STXBP2Q15833 593 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 ZNF658Q5TYW1 1059 aaPredicted RBP9.53□□□□□ -0.88
VPS11-206ENST00000614944 THOC7Q6I9Y2 204 aaKnown RBP9.53□□□□□ -0.88
VPS11-206ENST00000614944 SV2BQ7L1I2 683 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 VPS37AQ8NEZ2 397 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 NSMCE1Q8WV22 266 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 RABGGTAQ92696 567 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 UBE2OQ9C0C9 1292 aaKnown RBP9.53□□□□□ -0.88
VPS11-206ENST00000614944 ITGB1BP2Q9UKP3 347 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 GMEB1Q9Y692 573 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 CASP8AP2Q9UKL3 1982 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 ASB14A6NK59 587 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 P4HA2O15460 535 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 NDUFB5O43674 189 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 EYA4O95677 639 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 IGHA2P01877 340 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 ZNF792Q3KQV3 632 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 CCDC144BQ3MJ40 725 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 NCCRP1Q6ZVX7 275 aaPredicted RBP9.53□□□□□ -0.88
VPS11-206ENST00000614944 SYT2Q8N9I0 419 aaPredicted RBP9.53□□□□□ -0.88
VPS11-206ENST00000614944 ANKK1Q8NFD2 765 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 IL31RAQ8NI17 732 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 BCAS4Q8TDM0 211 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 HNRNPLLQ8WVV9 542 aaKnown RBP9.53□□□□□ -0.88
VPS11-206ENST00000614944 FGD4Q96M96 766 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 TRIM9Q9C026 710 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 TXNRD2Q9NNW7 524 aa9.53□□□□□ -0.88
VPS11-206ENST00000614944 SLC15A5A6NIM6 579 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 GAS7O60861 476 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 GFPT2O94808 682 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 FCER1AP12319 257 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 TAL1P17542 331 aaPredicted RBP9.52□□□□□ -0.88
VPS11-206ENST00000614944 APLP1P51693 650 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 SLC12A3P55017 1021 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 HUNKP57058 714 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 PNOCQ13519 176 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 GRB14Q14449 540 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 ANO6Q4KMQ2 910 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 SPECC1Q5M775 1068 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 PPP1R15BQ5SWA1 713 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 NUGGCQ68CJ6 796 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 CCDC121Q6ZUS5 278 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 UNC13DQ70J99 1090 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 CKAP2LQ8IYA6 745 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 TMEM174Q8WUU8 243 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 MMP19Q99542 508 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 PRELID1Q9Y255 219 aa9.52□□□□□ -0.88
VPS11-206ENST00000614944 GOLGA6L7A0A1B0GV03 622 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 TMEM88BA6NKF7 163 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 POTEB2H3BUK9 544 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 URI1O94763 535 aaPredicted RBP9.52□□□□□ -0.89
VPS11-206ENST00000614944 FGFR1OPO95684 399 aaKnown RBP9.52□□□□□ -0.89
VPS11-206ENST00000614944 ALDH1A1P00352 501 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 HOXC6P09630 235 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 MSL3P1P0C860 447 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 ARP10275 920 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 ATP4AP20648 1035 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 CDC25BP30305 580 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 ARPC4P59998 168 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 C4orf19Q8IY42 314 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 ENOX1Q8TC92 643 aaKnown RBP9.52□□□□□ -0.89
VPS11-206ENST00000614944 LRRC15Q8TF66 581 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 CDK5RAP3Q96JB5 506 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 UIMC1Q96RL1 719 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 PTPN18Q99952 460 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 EIF2AK1Q9BQI3 630 aaKnown RBP9.52□□□□□ -0.89
VPS11-206ENST00000614944 SIP14410 1827 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 ASTN1O14525 1302 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 PHLPP2Q6ZVD8 1323 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 SYNGAP1Q96PV0 1343 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 IGKV6D-21A0A0A0MT36 114 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 SOWAHBA6NEL2 793 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 POTEMA6NI47 508 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 TRIM64CA6NLI5 447 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 SHOX2O60902 331 aaPredicted RBP9.52□□□□□ -0.89
VPS11-206ENST00000614944 RPN1P04843 607 aaKnown RBP9.52□□□□□ -0.89
VPS11-206ENST00000614944 FOSL1P15407 271 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 CCT6AP40227 531 aaKnown RBP9.52□□□□□ -0.89
VPS11-206ENST00000614944 IFFO1Q0D2I5 559 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 KCTD2Q14681 263 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 WHAMMP3Q1A5X7 153 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 NSMFQ6X4W1 530 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 LUZP1Q86V48 1076 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 FAM228AQ86W67 206 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 CATSPER3Q86XQ3 398 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 ANKRD35Q8N283 1001 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 SREK1Q8WXA9 508 aaKnown RBP9.52□□□□□ -0.89
VPS11-206ENST00000614944 OXCT2Q9BYC2 517 aaPredicted RBP9.52□□□□□ -0.89
VPS11-206ENST00000614944 CBX8Q9HC52 389 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 PREBQ9HCU5 417 aa9.52□□□□□ -0.89
VPS11-206ENST00000614944 PP2D1A8MPX8 630 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 EVI5O60447 810 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 RGS20O76081 388 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 P4HBP07237 508 aaKnown RBP9.51□□□□□ -0.89
VPS11-206ENST00000614944 MAPTP10636 758 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms