RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SLC17A8Q8NDX2 589 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 ST13P5Q8NFI4 369 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-208ENST00000614678 HASPINQ8TF76 798 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 APOL5Q9BWW9 433 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 MTIF3Q9H2K0 278 aaKnown RBP6.32□□□□□ -1.4
CPNE3-208ENST00000614678 FAM105AQ9NUU6 356 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 ARHGEF35A5YM69 484 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 HIDE1A8MVS5 230 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 GPR182O15218 404 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 HSP90AA1P07900 732 aaKnown RBP6.32□□□□□ -1.4
CPNE3-208ENST00000614678 MLH1P40692 756 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 SARSP49591 514 aaKnown RBP6.32□□□□□ -1.4
CPNE3-208ENST00000614678 BCAR1P56945 870 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 ZC2HC1CQ53FD0 456 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-208ENST00000614678 TAS1R1Q7RTX1 841 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 CABP7Q86V35 215 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 INTS4Q96HW7 963 aaKnown RBP6.32□□□□□ -1.4
CPNE3-208ENST00000614678 TGS1Q96RS0 853 aaKnown RBP6.32□□□□□ -1.4
CPNE3-208ENST00000614678 GCOM2Q9BZD3 368 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-208ENST00000614678 IGFLR1Q9H665 355 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 GOLGA2P5Q9HBQ8 144 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 TUFT1Q9NNX1 390 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 AGPAT5Q9NUQ2 364 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 PCDHB7Q9Y5E2 793 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 PCDHB2Q9Y5E7 798 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 DGAT1O75907 488 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 HARSP12081 509 aaKnown RBP6.32□□□□□ -1.4
CPNE3-208ENST00000614678 CYP11B2P19099 503 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 CASP5P51878 434 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 FAM189BP81408 668 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 GPR153Q6NV75 609 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 SHC4Q6S5L8 630 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 OTUD6AQ7L8S5 288 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 FBXO22Q8NEZ5 403 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 KHSRPQ92945 711 aaKnown RBP eCLIP6.32□□□□□ -1.4
CPNE3-208ENST00000614678 NACC1Q96RE7 527 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 GAD1Q99259 594 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 REEP2Q9BRK0 252 aa6.32□□□□□ -1.4
CPNE3-208ENST00000614678 SPEGQ15772 3267 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 A0A0U1RQF3 1178 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 EIF5BO60841 1220 aaKnown RBP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 ZC3H11AO75152 810 aaKnown RBP eCLIP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 NPTXRO95502 500 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 F13A1P00488 732 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 PLA2G4BP0C869 781 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 NPTX2P47972 431 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 GPM6BQ13491 265 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 TCEAL5Q5H9L2 206 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 NT5DC1Q5TFE4 455 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 ZBTB33Q86T24 672 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 FIBCD1Q8N539 461 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 LINC00301Q8NCQ3 95 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 APBB2Q92870 758 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 ERCC4Q92889 916 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 ANKEF1Q9NU02 776 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 IPPQ9Y573 584 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 CCDC169A6NNP5 214 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 NMT1P30419 496 aaKnown RBP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 PDIA5Q14554 519 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 TMEM119Q4V9L6 283 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 SPOUT1Q5T280 376 aaKnown RBP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 KRT79Q5XKE5 535 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 VN1R2Q8NFZ6 395 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 FIZ1Q96SL8 496 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 TARS2Q9BW92 718 aaKnown RBP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 CD320Q9NPF0 282 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 LRFN2Q9ULH4 789 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 GDAQ9Y2T3 454 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 OFD1O75665 1012 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 WEE2P0C1S8 567 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 ZSCAN22P10073 491 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 ZSCAN20P17040 1043 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 SP100P23497 879 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 BMPR1AP36894 532 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 DNM2P50570 870 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 SCNN1GP51170 649 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 NPAS4Q8IUM7 802 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 SPPL3Q8TCT6 385 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 POF1BQ8WVV4 589 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 CCDC43Q96MW1 224 aaKnown RBP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 NAP1L4Q99733 375 aaKnown RBP6.31□□□□□ -1.4
CPNE3-208ENST00000614678 CCDC113Q9H0I3 377 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 ZHX3Q9H4I2 956 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 TBC1D13Q9NVG8 400 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 SNTG2Q9NY99 539 aa6.31□□□□□ -1.4
CPNE3-208ENST00000614678 TULP1O00294 542 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-208ENST00000614678 PARNO95453 639 aaKnown RBP6.3□□□□□ -1.4
CPNE3-208ENST00000614678 EYA4O95677 639 aa6.3□□□□□ -1.4
CPNE3-208ENST00000614678 RFC5P40937 340 aa6.3□□□□□ -1.4
CPNE3-208ENST00000614678 PRPHP41219 470 aa6.3□□□□□ -1.4
CPNE3-208ENST00000614678 WNT7BP56706 349 aa6.3□□□□□ -1.4
CPNE3-208ENST00000614678 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-208ENST00000614678 CLP1Q92989 425 aaKnown RBP6.3□□□□□ -1.4
CPNE3-208ENST00000614678 GAS2L1Q99501 681 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-208ENST00000614678 PDZD7Q9H5P4 517 aa6.3□□□□□ -1.4
CPNE3-208ENST00000614678 NRDE2Q9H7Z3 1164 aa6.3□□□□□ -1.4
CPNE3-208ENST00000614678 DBR1Q9UK59 544 aaKnown RBP6.3□□□□□ -1.4
CPNE3-208ENST00000614678 PRG3Q9Y2Y8 225 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-208ENST00000614678 MYMKA6NI61 221 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms