RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 AKAP3O75969 853 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 HOXC6P09630 235 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 SCP2P22307 547 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 PSMC2P35998 433 aaKnown RBP9.76□□□□□ -0.85
CCDC47-207ENST00000612558 FXR1P51114 621 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC47-207ENST00000612558 SOX10P56693 466 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 ARHGAP1Q07960 439 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 IRF5Q13568 498 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 ACVR2BQ13705 512 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 FIGNQ5HY92 759 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 TMEM63BQ5T3F8 832 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 IQSEC1Q6DN90 963 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 C12orf56Q8IXR9 622 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 EXOC8Q8IYI6 725 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 NPLOC4Q8TAT6 608 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 ATP8B4Q8TF62 1192 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 BSNDQ8WZ55 320 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 PCMTD1Q96MG8 357 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-207ENST00000612558 NAA15Q9BXJ9 866 aaKnown RBP9.76□□□□□ -0.85
CCDC47-207ENST00000612558 POLR3FQ9H1D9 316 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-207ENST00000612558 CAPN11Q9UMQ6 739 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 TBX20Q9UMR3 447 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 FRMD4BQ9Y2L6 1034 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 LUC7L2Q9Y383 392 aaKnown RBP9.76□□□□□ -0.85
CCDC47-207ENST00000612558 ZNF236Q9UL36 1845 aa9.76□□□□□ -0.85
CCDC47-207ENST00000612558 TTC26A0AVF1 554 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 DENND3A2RUS2 1198 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 ST8SIA5O15466 376 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 ARHGAP6O43182 974 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 CA12O43570 354 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 MAFO75444 373 aaPredicted RBP9.75□□□□□ -0.85
CCDC47-207ENST00000612558 TOMM70O94826 608 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 XRCC5P13010 732 aaKnown RBP9.75□□□□□ -0.85
CCDC47-207ENST00000612558 TRIM21P19474 475 aaKnown RBP9.75□□□□□ -0.85
CCDC47-207ENST00000612558 KRT9P35527 623 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 ARL2P36404 184 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 ADCYAP1R1P41586 468 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 HIC1Q14526 733 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 PLCB4Q15147 1175 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 PPP2R5AQ15172 486 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 PUS10Q3MIT2 529 aaKnown RBP9.75□□□□□ -0.85
CCDC47-207ENST00000612558 PLA2G2CQ5R387 149 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 TMEM139Q8IV31 216 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 CRIPAKQ8N1N5 446 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 C17orf53Q8N3J3 647 aaPredicted RBP9.75□□□□□ -0.85
CCDC47-207ENST00000612558 PPTC7Q8NI37 304 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 KCNN1Q92952 543 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 BORCS6Q96GS4 357 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 IKZF4Q9H2S9 585 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 KCND1Q9NSA2 647 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 SIK3Q9Y2K2 1263 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 A0A1W2PQJ5 194 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 RASSF10A6NK89 507 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 GAS2O43903 313 aaKnown RBP9.75□□□□□ -0.85
CCDC47-207ENST00000612558 HBP1O60381 514 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 PPFIA4O75335 1185 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 ALDH1A1P00352 501 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 MARK3P27448 753 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 NAMPTP43490 491 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 CASP4P49662 377 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 KCNH2Q12809 1159 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 CRHR2Q13324 411 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 DUSP28Q4G0W2 176 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 TRIM50Q86XT4 487 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 MAP4K3Q8IVH8 894 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 FAM186BQ8IYM0 893 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 CYP4X1Q8N118 509 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 ZNF397Q8NF99 534 aaPredicted RBP9.75□□□□□ -0.85
CCDC47-207ENST00000612558 OR8K1Q8NGG5 319 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 SOCS4Q8WXH5 440 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 USP6NLQ92738 828 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 TMEM143Q96AN5 459 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 JPH2Q9BR39 696 aaPredicted RBP9.75□□□□□ -0.85
CCDC47-207ENST00000612558 TTYH3Q9C0H2 523 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 ABHD10Q9NUJ1 306 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 ERAP1Q9NZ08 941 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 ARHGAP28Q9P2N2 729 aa9.75□□□□□ -0.85
CCDC47-207ENST00000612558 ZHX1Q9UKY1 873 aaPredicted RBP9.75□□□□□ -0.85
CCDC47-207ENST00000612558 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.74□□□□□ -0.85
CCDC47-207ENST00000612558 RNF225M0QZC1 329 aaPredicted RBP9.74□□□□□ -0.85
CCDC47-207ENST00000612558 TNPO2O14787 897 aaKnown RBP9.74□□□□□ -0.85
CCDC47-207ENST00000612558 CCP110O43303 1012 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 EXOC3O60645 756 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 AFPP02771 609 aaKnown RBP9.74□□□□□ -0.85
CCDC47-207ENST00000612558 LGALS2P05162 132 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 SMPD1P17405 629 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 FECHP22830 423 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 GLRA2P23416 452 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 CNGA1P29973 690 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 RGS2P41220 211 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 KLK7P49862 253 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 CYP2J2P51589 502 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 ZBED6P86452 979 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 CTC1Q2NKJ3 1217 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 BRDTQ58F21 947 aaPredicted RBP9.74□□□□□ -0.85
CCDC47-207ENST00000612558 GJC2Q5T442 439 aaPredicted RBP9.74□□□□□ -0.85
CCDC47-207ENST00000612558 IER5Q5VY09 327 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 OLFML2BQ68BL8 750 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 RDH13Q8NBN7 331 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 AFG1LQ8WV93 481 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms