RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PPP2R5AQ15172 486 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 EPC2Q52LR7 807 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 SLFN11Q7Z7L1 901 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 PHLDB2Q86SQ0 1253 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 RPUSD2Q8IZ73 545 aaKnown RBP15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 PPM1KQ8N3J5 372 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 XXYLT1Q8NBI6 393 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 FAM76AQ8TAV0 307 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 GOLGA5Q8TBA6 731 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 CTNNBL1Q8WYA6 563 aaPredicted RBP15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 ALG3Q92685 438 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 PI4K2AQ9BTU6 479 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 KCND2Q9NZV8 630 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 PIM2Q9P1W9 311 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 PGRMC1O00264 195 aaKnown RBP15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 CYP26A1O43174 497 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 DAPK3O43293 454 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 TNNC1P63316 161 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 FSTL1Q12841 308 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 SLC47A2Q86VL8 602 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 MCF2L2Q86YR7 1114 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 KRT35Q92764 455 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 CAVIN3Q969G5 261 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 KREMEN1Q96MU8 473 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 AGPAT1Q99943 283 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 GABBR1Q9UBS5 961 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 RNF14Q9UBS8 474 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 RSPH14Q9UHP6 348 aa15.25■□□□□ 0.03
PCDHGA3-202ENST00000612467 PFASO15067 1338 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 UBE4BO95155 1302 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 HSF2BPO75031 334 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 RGS20O76081 388 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 FTLP02792 175 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 PAK2Q13177 524 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 SNRNP48Q6IEG0 339 aaKnown RBP15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 HES6Q96HZ4 224 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 TRIM66O15016 1216 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 DDX3YO15523 660 aaKnown RBP15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 LMNB1P20700 586 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 NPTX2P47972 431 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 PPATQ06203 517 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 GLE1Q53GS7 698 aaKnown RBP15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 SLC39A4Q6P5W5 647 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 NOP9Q86U38 636 aaKnown RBP15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 SLC9A9Q8IVB4 645 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 RFFLQ8WZ73 363 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 RUFY1Q96T51 708 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 SH3GL2Q99962 352 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 CENPHQ9H3R5 247 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 AMFRQ9UKV5 643 aa15.24■□□□□ 0.03
PCDHGA3-202ENST00000612467 DENND3A2RUS2 1198 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 DLATP10515 647 aaKnown RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 MXI1P50539 228 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 C2CD6Q53TS8 623 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 CFAP58Q5T655 872 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 ACTRT1Q8TDG2 376 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 LPAR1Q92633 364 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 PBKQ96KB5 322 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 WRNIP1Q96S55 665 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 CNOT7Q9UIV1 285 aaKnown RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 DBR1Q9UK59 544 aaKnown RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 MMEP08473 750 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 TMEM253P0C7T8 217 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 CHRNB2P17787 502 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 MUTP22033 750 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 SSTR3P32745 418 aaPredicted RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 GTF2BQ00403 316 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 SNRNP35Q16560 246 aaKnown RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 IFI16Q16666 785 aaKnown RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 SWSAP1Q6NVH7 229 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 INTS8Q75QN2 995 aaKnown RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 KCTD17Q8N5Z5 321 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 ZNF526Q8TF50 670 aaPredicted RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 GLG1Q92896 1179 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 CTTNBP2NLQ9P2B4 639 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 SUCLA2Q9P2R7 463 aaPredicted RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 COL11A1P12107 1806 aaPredicted RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 KIAA1217Q5T5P2 1943 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 NR3C2P08235 984 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 TNFRSF8P28908 595 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 CNGA1P29973 690 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 PSMC5P62195 406 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 PDCLQ13371 301 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 KIF22Q14807 665 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 DALRD3Q5D0E6 543 aaKnown RBP15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 LLGL2Q6P1M3 1020 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 CYFIP1Q7L576 1253 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 IQCKQ8N0W5 287 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 TMEM161BQ8NDZ6 487 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 NEK9Q8TD19 979 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 TAS1R2Q8TE23 839 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 CEP170P1Q96L14 293 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 TMEM206Q9H813 350 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 TBC1D22BQ9NU19 505 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 TBX20Q9UMR3 447 aa15.23■□□□□ 0.03
PCDHGA3-202ENST00000612467 WDR64B1ANS9 1081 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 CTNND1O60716 968 aaKnown RBP15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 ZBED4O75132 1171 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms