RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CGNQ9P2M7 1197 aaKnown RBP19.22■□□□□ 0.67
SREK1-216ENST00000612404 CSDE1O75534 798 aaKnown RBP19.21■□□□□ 0.67
SREK1-216ENST00000612404 PRKCBP05771 671 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 MTIF2P46199 727 aaKnown RBP19.21■□□□□ 0.67
SREK1-216ENST00000612404 KRT31Q15323 416 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 CCDC40Q4G0X9 1142 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 TAF2Q6P1X5 1199 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 FILIP1Q7Z7B0 1213 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 ZC3H3Q8IXZ2 948 aaKnown RBP19.21■□□□□ 0.67
SREK1-216ENST00000612404 KCNN1Q92952 543 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 ZNF333Q96JL9 665 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 CBWD1Q9BRT8 395 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 XPO4Q9C0E2 1151 aaKnown RBP19.21■□□□□ 0.67
SREK1-216ENST00000612404 CCDC113Q9H0I3 377 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 MINDY3Q9H8M7 445 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 STARD7Q9NQZ5 370 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 DNM1LO00429 736 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 ZNF75DP51815 510 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 SNRPFP62306 86 aaKnown RBP19.21■□□□□ 0.67
SREK1-216ENST00000612404 CDC42EP1Q00587 391 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 POU5F1BQ06416 359 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 PTGISQ16647 500 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 ZNF410Q86VK4 478 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 CTAGE1Q96RT6 745 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 TARS2Q9BW92 718 aaKnown RBP19.21■□□□□ 0.67
SREK1-216ENST00000612404 NFKBIZQ9BYH8 718 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 TAB2Q9NYJ8 693 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 LIMA1Q9UHB6 759 aaKnown RBP19.21■□□□□ 0.67
SREK1-216ENST00000612404 PHF24Q9UPV7 400 aa19.21■□□□□ 0.67
SREK1-216ENST00000612404 SIP14410 1827 aa19.2■□□□□ 0.66
SREK1-216ENST00000612404 MBTD1Q05BQ5 628 aa19.2■□□□□ 0.66
SREK1-216ENST00000612404 NFIL3Q16649 462 aa19.2■□□□□ 0.66
SREK1-216ENST00000612404 TMEM132AQ24JP5 1023 aa19.2■□□□□ 0.66
SREK1-216ENST00000612404 SLC39A4Q6P5W5 647 aa19.2■□□□□ 0.66
SREK1-216ENST00000612404 NAP1L5Q96NT1 182 aaPredicted RBP19.2■□□□□ 0.66
SREK1-216ENST00000612404 VPS16Q9H269 839 aa19.2■□□□□ 0.66
SREK1-216ENST00000612404 OGDHLQ9ULD0 1010 aa19.2■□□□□ 0.66
SREK1-216ENST00000612404 NOD1Q9Y239 953 aa19.2■□□□□ 0.66
SREK1-216ENST00000612404 PES1O00541 588 aaKnown RBP19.19■□□□□ 0.66
SREK1-216ENST00000612404 CBFA2T2O43439 604 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 EXOC3O60645 756 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 GNA14O95837 355 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 EDN1P05305 212 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 PRKCSHP14314 528 aaPredicted RBP19.19■□□□□ 0.66
SREK1-216ENST00000612404 CASP4P49662 377 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 NME8Q8N427 588 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 POMGNT1Q8WZA1 660 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 TUBGCP2Q9BSJ2 902 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 MRPL4Q9BYD3 311 aaKnown RBP19.19■□□□□ 0.66
SREK1-216ENST00000612404 ADAMTS10Q9H324 1103 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 HSPBP1Q9NZL4 362 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 FRMD4BQ9Y2L6 1034 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 GPR32O75388 356 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 AKAP3O75969 853 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 IQCF3P0C7M6 154 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 EPB41P11171 864 aaKnown RBP19.19■□□□□ 0.66
SREK1-216ENST00000612404 ADSSP30520 456 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 DEKP35659 375 aaKnown RBP19.19■□□□□ 0.66
SREK1-216ENST00000612404 MATR3P43243 847 aaKnown RBP eCLIP19.19■□□□□ 0.66
SREK1-216ENST00000612404 SERINC5Q86VE9 423 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 SLC9A9Q8IVB4 645 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 TRMT13Q9NUP7 481 aaKnown RBP19.19■□□□□ 0.66
SREK1-216ENST00000612404 DMAC2Q9NW81 257 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 ANKFY1Q9P2R3 1169 aa19.19■□□□□ 0.66
SREK1-216ENST00000612404 A0A0U1RQG5 324 aaPredicted RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 TTLL13PA6NNM8 815 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 ACKR2O00590 384 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 TFRCP02786 760 aaKnown RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 TPM3P06753 285 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 TPM2P07951 284 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 COPB1P53618 953 aaKnown RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 PRPF4BQ13523 1007 aaKnown RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 FILIP1LQ4L180 1135 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 APTXQ7Z2E3 356 aaKnown RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 RSPH3Q86UC2 560 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 IFNLR1Q8IU57 520 aaPredicted RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 C12orf56Q8IXR9 622 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 OSMRQ99650 979 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 GCOM2Q9BZD3 368 aaPredicted RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 FZD8Q9H461 694 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 CDHR5Q9HBB8 845 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 PRMT7Q9NVM4 692 aaPredicted RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 N4BP3O15049 544 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 SLC16A3O15427 465 aaKnown RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 PIGRP01833 764 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 PSMC2P35998 433 aaKnown RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 PTPN11Q06124 597 aaPredicted RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 MYBPC2Q14324 1141 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 XXYLT1Q8NBI6 393 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 RDH13Q8NBN7 331 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 U2AF1L4Q8WU68 220 aaKnown RBP19.18■□□□□ 0.66
SREK1-216ENST00000612404 ARMC5Q96C12 935 aa19.18■□□□□ 0.66
SREK1-216ENST00000612404 LRRC10BA6NIK2 292 aa19.17■□□□□ 0.66
SREK1-216ENST00000612404 B4GALT5O43286 388 aa19.17■□□□□ 0.66
SREK1-216ENST00000612404 ZPBP2Q6X784 338 aa19.17■□□□□ 0.66
SREK1-216ENST00000612404 SRGAP1Q7Z6B7 1085 aa19.17■□□□□ 0.66
SREK1-216ENST00000612404 FAM186BQ8IYM0 893 aa19.17■□□□□ 0.66
SREK1-216ENST00000612404 SAAL1Q96ER3 474 aa19.17■□□□□ 0.66
SREK1-216ENST00000612404 MRFAP1L1Q96HT8 127 aa19.17■□□□□ 0.66
SREK1-216ENST00000612404 ZBTB45Q96K62 511 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms