RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 SUPT20HL1Q3ZLR7 823 aa12.92□□□□□ -0.34
SRRT-213ENST00000611405 MCPH1Q8NEM0 835 aa12.92□□□□□ -0.34
SRRT-213ENST00000611405 PLEKHO2Q8TD55 490 aa12.92□□□□□ -0.34
SRRT-213ENST00000611405 A1CFQ9NQ94 594 aaKnown RBP12.92□□□□□ -0.34
SRRT-213ENST00000611405 GDF3Q9NR23 364 aa12.92□□□□□ -0.34
SRRT-213ENST00000611405 GPRC5DQ9NZD1 345 aa12.92□□□□□ -0.34
SRRT-213ENST00000611405 TMEM59LQ9UK28 342 aa12.92□□□□□ -0.34
SRRT-213ENST00000611405 RLFQ13129 1914 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 DENND3A2RUS2 1198 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 SPATA31C2B4DYI2 1134 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 ZNF862O60290 1169 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 RGS20O76081 388 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 NNTQ13423 1086 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 TRMT1LQ7Z2T5 733 aaKnown RBP12.91□□□□□ -0.34
SRRT-213ENST00000611405 ARHGEF19Q8IW93 802 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 CALR3Q96L12 384 aaKnown RBP12.91□□□□□ -0.34
SRRT-213ENST00000611405 TMEM117Q9H0C3 514 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 SLC9A2Q9UBY0 812 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 FAN1Q9Y2M0 1017 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 AFG3L2Q9Y4W6 797 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 ANKRD63C9JTQ0 380 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 DGAT1O75907 488 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 ADRB2P07550 413 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 ABCD1P33897 745 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 SNRNP35Q16560 246 aaKnown RBP12.91□□□□□ -0.34
SRRT-213ENST00000611405 SWSAP1Q6NVH7 229 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 SND1Q7KZF4 910 aaKnown RBP eCLIP12.91□□□□□ -0.34
SRRT-213ENST00000611405 DAAM2Q86T65 1068 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 CAVIN3Q969G5 261 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 KRT12Q99456 494 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 GGA3Q9NZ52 723 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 KCNG1Q9UIX4 513 aa12.91□□□□□ -0.34
SRRT-213ENST00000611405 ZC3H4Q9UPT8 1303 aaKnown RBP12.91□□□□□ -0.34
SRRT-213ENST00000611405 ANKRD62A6NC57 917 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 CEP104O60308 925 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 LRRN2O75325 713 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 ZBTB48P10074 688 aaPredicted RBP12.9□□□□□ -0.34
SRRT-213ENST00000611405 CNGA1P29973 690 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 ADSSP30520 456 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 MRPS25P82663 173 aaKnown RBP12.9□□□□□ -0.34
SRRT-213ENST00000611405 ENPEPQ07075 957 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 SH3D19Q5HYK7 790 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 MIS18BP1Q6P0N0 1132 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 ABHD15Q6UXT9 468 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 NT5DC3Q86UY8 548 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 ZSWIM2Q8NEG5 633 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 SLC35G2Q8TBE7 412 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 PDLIM7Q9NR12 457 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 AMFRQ9UKV5 643 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 FZD1Q9UP38 647 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 GOLGA8IPA6NC78 632 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 GOLGA8JA6NMD2 632 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 SPDYE16A6NNV3 312 aaPredicted RBP12.9□□□□□ -0.34
SRRT-213ENST00000611405 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 H0YCG3 227 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 PGRMC1O00264 195 aaKnown RBP12.9□□□□□ -0.34
SRRT-213ENST00000611405 SYF2O95926 243 aaKnown RBP12.9□□□□□ -0.34
SRRT-213ENST00000611405 GTF2H1P32780 548 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 ACTR2P61160 394 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 USP37Q86T82 979 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 CBWD2Q8IUF1 395 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 METTL13Q8N6R0 699 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 BSNDQ8WZ55 320 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 HES6Q96HZ4 224 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 GDAP1L1Q96MZ0 367 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.9□□□□□ -0.342e-8■■□□□ 12.8
SRRT-213ENST00000611405 GOLPH3Q9H4A6 298 aa12.9□□□□□ -0.34
SRRT-213ENST00000611405 SEPT11Q9NVA2 429 aaKnown RBP12.9□□□□□ -0.34
SRRT-213ENST00000611405 CLSTN1O94985 981 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 HEXIM1O94992 359 aaKnown RBP12.89□□□□□ -0.35
SRRT-213ENST00000611405 GYS2P54840 703 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 KRT39Q6A163 491 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 RASGEF1CQ8N431 466 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 CHST13Q8NET6 341 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 IFT74Q96LB3 600 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 MFSD14AQ96MC6 490 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 FBXL18Q96ME1 805 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 HINFPQ9BQA5 517 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 ATP6V0A4Q9HBG4 840 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 TMEM8AQ9HCN3 771 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 DIS3Q9Y2L1 958 aaKnown RBP12.89□□□□□ -0.35
SRRT-213ENST00000611405 GOLGA6BA6NDN3 693 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 GLI1P08151 1106 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 MFAP3P55082 362 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 RNASE9P60153 205 aaKnown RBP12.89□□□□□ -0.35
SRRT-213ENST00000611405 PPATQ06203 517 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 PAK2Q13177 524 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 TCEAL1Q15170 157 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 RHOT2Q8IXI1 618 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 GPC2Q8N158 579 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.89□□□□□ -0.357e-9■■■■□ 21.3
SRRT-213ENST00000611405 PARD3BQ8TEW8 1205 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 CYP26B1Q9NR63 512 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
SRRT-213ENST00000611405 COQ4Q9Y3A0 265 aa12.89□□□□□ -0.35
SRRT-213ENST00000611405 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms