RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ACER1Q8TDN7 264 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 C9orf72Q96LT7 481 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 KIFC3Q9BVG8 833 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 MAK16Q9BXY0 300 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 KCNQ5Q9NR82 932 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 ABCC6O95255 1503 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 TCP11X1B4DZS4 312 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 SLC16A3O15427 465 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 C21orf2O43822 256 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 TMEM253P0C7T8 217 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 PEX19P40855 299 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 NPEPPSP55786 919 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 ZNF844Q08AG5 666 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 NBPF9Q3BBW0 867 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 FYB2Q5VWT5 728 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 HGSNATQ68CP4 663 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 PARP9Q8IXQ6 854 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 PI4K2AQ9BTU6 479 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 PRM3Q9NNZ6 103 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 GPRC5CQ9NQ84 441 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 GDF3Q9NR23 364 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 NYAP2Q9P242 653 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 PCDHAC2Q9Y5I4 1007 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 LRRD1A4D1F6 860 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 RASA4BC9J798 803 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 F8VZ95 297 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 PI4K2BG5E9Z4 385 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 RASA4O43374 803 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 NEBLO76041 1014 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 CA4P22748 312 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 IL9RQ01113 521 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 KRT17Q04695 432 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 MYO1EQ12965 1108 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 KYNUQ16719 465 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 PLA2G4FQ68DD2 849 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 MCF2L2Q86YR7 1114 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 PALM2Q8IXS6 379 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 VPS52Q8N1B4 723 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 LRRC8CQ8TDW0 803 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 EPS8L3Q8TE67 593 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 INPP4AQ96PE3 977 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 LBHD1Q9BQE6 289 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 CBWD1Q9BRT8 395 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 UBXN6Q9BZV1 441 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 SLC40A1Q9NP59 571 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 ACP6Q9NPH0 428 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 HSPBP1Q9NZL4 362 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 SEL1LQ9UBV2 794 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 DIS3Q9Y2L1 958 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 PCDHGC5Q9Y5F6 944 aa7.36□□□□□ -1.23
SYNPO2-206ENST00000610556 KCPQ6ZWJ8 1503 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 TISP43B9A030 160 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 TBX3O15119 743 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 PPP1R11O60927 126 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 SPAG7O75391 227 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ARP10275 920 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ATP2A2P16615 1042 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 QARSP47897 775 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 OSTNP61366 133 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 EPHA7Q15375 998 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 CYFIP1Q7L576 1253 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 KIF2BQ8N4N8 673 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 MSL3Q8N5Y2 521 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ACTRT1Q8TDG2 376 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 RSAD2Q8WXG1 361 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 CPA5Q8WXQ8 436 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ATG4AQ8WYN0 398 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 MCUR1Q96AQ8 359 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ARHGEF26Q96DR7 871 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 RMDN3Q96TC7 470 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 SEMA4AQ9H3S1 761 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 BCAS3Q9H6U6 928 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 QTRT2Q9H974 415 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 SAYSD1Q9NPB0 183 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 TAS2R14Q9NYV8 317 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ADAM22Q9P0K1 906 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 NOL4O94818 638 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 KRT1P04264 644 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 P4HBP07237 508 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 GYS1P13807 737 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 CHRNA5P30532 468 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 HSPA9P38646 679 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 DHX34Q14147 1143 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 TTLL12Q14166 644 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ANKRD20A3Q5VUR7 823 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 TMEM270Q6UE05 265 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 SCARA5Q6ZMJ2 495 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ZNF662Q6ZS27 426 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 ARHGEF18Q6ZSZ5 1173 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 BARGINQ6ZT62 677 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 KCNV2Q8TDN2 545 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 MASTLQ96GX5 879 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 SMC6Q96SB8 1091 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 PITPNM3Q9BZ71 974 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 PICK1Q9NRD5 415 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 FGFR1OP2Q9NVK5 253 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 H0Y3Z8 333 aa7.35□□□□□ -1.23
SYNPO2-206ENST00000610556 PHF2O75151 1096 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms