RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 TRIB2Q92519 343 aa7.55□□□□□ -1.2
CDC40-207ENST00000606893 LARP4BQ92615 738 aaKnown RBP7.55□□□□□ -1.2
CDC40-207ENST00000606893 SPATA33Q96N06 139 aa7.55□□□□□ -1.2
CDC40-207ENST00000606893 DDX47Q9H0S4 455 aaKnown RBP7.55□□□□□ -1.2
CDC40-207ENST00000606893 BHMT2Q9H2M3 363 aa7.55□□□□□ -1.2
CDC40-207ENST00000606893 NDST4Q9H3R1 872 aa7.55□□□□□ -1.2
CDC40-207ENST00000606893 PANK4Q9NVE7 773 aa7.55□□□□□ -1.2
CDC40-207ENST00000606893 TRPC6Q9Y210 931 aa7.55□□□□□ -1.2
CDC40-207ENST00000606893 KDM3AQ9Y4C1 1321 aa7.55□□□□□ -1.2
CDC40-207ENST00000606893 SCN4AP35499 1836 aa7.55□□□□□ -1.2
CDC40-207ENST00000606893 EME2A4GXA9 379 aaPredicted RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 ZNF263O14978 683 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 MSH4O15457 936 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 FAM153BP0C7A2 387 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 KRT13P13646 458 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 SREBF1P36956 1147 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 CASP5P51878 434 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 SETQ01105 290 aaPredicted RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 GUCY1A3Q02108 690 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 KLHL30Q0D2K2 578 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 FAM110CQ1W6H9 321 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 FAM153CQ494X1 144 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 MTERF2Q49AM1 385 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 DAB2IPQ5VWQ8 1189 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 LMBRD2Q68DH5 695 aaPredicted RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 APTXQ7Z2E3 356 aaKnown RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 RIOX2Q8IUF8 465 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 CEP112Q8N8E3 955 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 GTF3C2Q8WUA4 911 aaPredicted RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 RABGGTAQ92696 567 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 TNFRSF25Q93038 417 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 ARL8AQ96BM9 186 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 MIEF2Q96C03 454 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 DUSP9Q99956 384 aaKnown RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 CELF4Q9BZC1 486 aaKnown RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 PRDM16Q9HAZ2 1276 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 RBM12Q9NTZ6 932 aaKnown RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 LIMA1Q9UHB6 759 aaKnown RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 FAM153AQ9UHL3 310 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 PTPN22Q9Y2R2 807 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDC40-207ENST00000606893 MAST2Q6P0Q8 1798 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 TTC36A6NLP5 189 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 TBCAO75347 108 aaKnown RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 PALMO75781 387 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 PIAS1O75925 651 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 CTSHP09668 335 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 NMT1P30419 496 aaKnown RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 HNRNPH1P31943 449 aaKnown RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 PAFAH1B1P43034 410 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 CARSP49589 748 aaKnown RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 TBX2Q13207 712 aaPredicted RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 ADAM9Q13443 819 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 PDIA5Q14554 519 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 TMEM132AQ24JP5 1023 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 C11orf91Q3C1V1 193 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 SYCP2LQ5T4T6 812 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 C8orf74Q6P047 294 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 SYCP3Q8IZU3 236 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 SAMD3Q8N6K7 520 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 EXOC4Q96A65 974 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 RPS6KL1Q9Y6S9 549 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 GOLGA6CA6NDK9 693 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 GOLGA6BA6NDN3 693 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 USO1O60763 962 aaKnown RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 FKTNO75072 461 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 TACC1O75410 805 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 AP1G2O75843 785 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 IVLP07476 585 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 GOLGA6DP0CG33 693 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 NR2F2P24468 414 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 GCLCP48506 637 aaPredicted RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 IFNAR2P48551 515 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 GNGT1P63211 74 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 C17orf99Q6UX52 265 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 GBP6Q6ZN66 633 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 DPH6Q7L8W6 267 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 ADSSL1Q8N142 457 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 LRRC71Q8N4P6 559 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 REPS2Q8NFH8 660 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 N4BP2L2Q92802 583 aaPredicted RBP7.54□□□□□ -1.2
CDC40-207ENST00000606893 DYDC2Q96IM9 177 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 BPIFA3Q9BQP9 254 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 SELENOOQ9BVL4 669 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 CUEDC2Q9H467 287 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 GOLGA6AQ9NYA3 693 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 ARHGAP20Q9P2F6 1191 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 GABBR1Q9UBS5 961 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 RWDD2AQ9UIY3 292 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 C5orf42Q9H799 3197 aa7.54□□□□□ -1.2
CDC40-207ENST00000606893 PIK3CDO00329 1044 aa7.53□□□□□ -1.2
CDC40-207ENST00000606893 TBX3O15119 743 aa7.53□□□□□ -1.2
CDC40-207ENST00000606893 ADCY6O43306 1168 aa7.53□□□□□ -1.2
CDC40-207ENST00000606893 DKC1O60832 514 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDC40-207ENST00000606893 ZNF200P98182 395 aaPredicted RBP7.53□□□□□ -1.2
CDC40-207ENST00000606893 CCDC38Q502W7 563 aa7.53□□□□□ -1.2
CDC40-207ENST00000606893 BEND6Q5SZJ8 279 aaPredicted RBP7.53□□□□□ -1.2
CDC40-207ENST00000606893 BCAS4Q8TDM0 211 aa7.53□□□□□ -1.2
CDC40-207ENST00000606893 TINF2Q9BSI4 451 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms