RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 MRPL43Q8N983 215 aaKnown RBP14.86□□□□□ -0.03
CTSA-213ENST00000606782 PGBD4Q96DM1 585 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 MTRQ99707 1265 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 TBC1D13Q9NVG8 400 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 RAPGEFL1Q9UHV5 662 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 PCDHB2Q9Y5E7 798 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 ARID2Q68CP9 1835 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 C2orf71A6NGG8 1288 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 MEIS3P2A8K0S8 358 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 HIDE1A8MVS5 230 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 PRR33A8MZF0 331 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 LOC730098B7Z3J9 87 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 INPPL1O15357 1258 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 SPATA31C1P0DKV0 1188 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 ARL2P36404 184 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 TXKP42681 527 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 CBX2Q14781 532 aaPredicted RBP14.85□□□□□ -0.03
CTSA-213ENST00000606782 HERC4Q5GLZ8 1057 aaPredicted RBP14.85□□□□□ -0.03
CTSA-213ENST00000606782 PLPP4Q5VZY2 271 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 AGMOQ6ZNB7 445 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 TMC7Q7Z402 723 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 NOSTRINQ8IVI9 506 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 RNF149Q8NC42 400 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 LPPQ93052 612 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 IPO9Q96P70 1041 aaKnown RBP14.85□□□□□ -0.03
CTSA-213ENST00000606782 NFKBIZQ9BYH8 718 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 S1PR5Q9H228 398 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 TMEM60Q9H2L4 133 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 NRDE2Q9H7Z3 1164 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 ENTPD7Q9NQZ7 604 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 DAXXQ9UER7 740 aaPredicted RBP14.85□□□□□ -0.03
CTSA-213ENST00000606782 USP15Q9Y4E8 981 aaPredicted RBP14.85□□□□□ -0.03
CTSA-213ENST00000606782 IRAK3Q9Y616 596 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 CNTNAP2Q9UHC6 1331 aa14.85□□□□□ -0.03
CTSA-213ENST00000606782 GALTP07902 379 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 SRGAP2BP0DMP2 458 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 HOXB8P17481 243 aaPredicted RBP14.84□□□□□ -0.03
CTSA-213ENST00000606782 NCLP19338 710 aaKnown RBP14.84□□□□□ -0.03
CTSA-213ENST00000606782 AXLP30530 894 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 RARRES1P49788 294 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 RBM10P98175 930 aaKnown RBP14.84□□□□□ -0.03
CTSA-213ENST00000606782 SMC1AQ14683 1233 aaKnown RBP14.84□□□□□ -0.03
CTSA-213ENST00000606782 MCTP1Q6DN14 999 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 ANKRD54Q6NXT1 300 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 DDX53Q86TM3 631 aaKnown RBP14.84□□□□□ -0.03
CTSA-213ENST00000606782 CNNM3Q8NE01 707 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 CCDC51Q96ER9 411 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 TMEM169Q96HH4 297 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 IGSF21Q96ID5 467 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 PHF7Q9BWX1 381 aaPredicted RBP14.84□□□□□ -0.03
CTSA-213ENST00000606782 TUFT1Q9NNX1 390 aa14.84□□□□□ -0.03
CTSA-213ENST00000606782 MUC6Q6W4X9 2439 aa14.83□□□□□ -0.04
CTSA-213ENST00000606782 VPS37CA5D8V6 355 aaPredicted RBP14.83□□□□□ -0.04
CTSA-213ENST00000606782 TFDP1Q14186 410 aa14.83□□□□□ -0.04
CTSA-213ENST00000606782 AMHR2Q16671 573 aa14.83□□□□□ -0.04
CTSA-213ENST00000606782 SYCE2Q6PIF2 218 aa14.83□□□□□ -0.04
CTSA-213ENST00000606782 TMEM173Q86WV6 379 aaPredicted RBP14.83□□□□□ -0.04
CTSA-213ENST00000606782 RNF135Q8IUD6 432 aa14.83□□□□□ -0.04
CTSA-213ENST00000606782 SMG8Q8ND04 991 aaKnown RBP14.83□□□□□ -0.04
CTSA-213ENST00000606782 POLR3CQ9BUI4 534 aaPredicted RBP14.83□□□□□ -0.04
CTSA-213ENST00000606782 ZBP1Q9H171 429 aa14.83□□□□□ -0.04
CTSA-213ENST00000606782 UBN1Q9NPG3 1134 aa14.83□□□□□ -0.04
CTSA-213ENST00000606782 KANSL3Q9P2N6 904 aa14.83□□□□□ -0.04
CTSA-213ENST00000606782 STK39Q9UEW8 545 aa14.83□□□□□ -0.04
CTSA-213ENST00000606782 DBR1Q9UK59 544 aaKnown RBP14.83□□□□□ -0.04
CTSA-213ENST00000606782 ZDHHC9Q9Y397 364 aa14.83□□□□□ -0.04
CTSA-213ENST00000606782 C5orf42Q9H799 3197 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 PIEZO1Q92508 2521 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 FAM86C2PA6NEL3 165 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 POTEMA6NI47 508 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 NT5C1B-RDH14C9J2C7 533 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 TSPAN1O60635 241 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 ZC3H11AO75152 810 aaKnown RBP eCLIP14.82□□□□□ -0.04
CTSA-213ENST00000606782 BRD1O95696 1058 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 ZSCAN22P10073 491 aaPredicted RBP14.82□□□□□ -0.04
CTSA-213ENST00000606782 CTSAP10619 480 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 GLRA2P23416 452 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 MCM7P33993 719 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 TRAPPC10P48553 1259 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 TOB1P50616 345 aaPredicted RBP14.82□□□□□ -0.04
CTSA-213ENST00000606782 MBTD1Q05BQ5 628 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 RESTQ13127 1097 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 GNL2Q13823 731 aaKnown RBP14.82□□□□□ -0.04
CTSA-213ENST00000606782 PKP1Q13835 747 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 CAPSQ13938 189 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 GIT2Q14161 759 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 BMS1Q14692 1282 aaKnown RBP14.82□□□□□ -0.04
CTSA-213ENST00000606782 CATSPER3Q86XQ3 398 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 ZNF280BQ86YH2 543 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 VPS52Q8N1B4 723 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 ASAP3Q8TDY4 903 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 PIGOQ8TEQ8 1089 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 TMEM175Q9BSA9 504 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 ZSCAN16Q9H4T2 348 aaPredicted RBP14.82□□□□□ -0.04
CTSA-213ENST00000606782 RSAD1Q9HA92 442 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 BMP2KQ9NSY1 1161 aaPredicted RBP14.82□□□□□ -0.04
CTSA-213ENST00000606782 TECTAO75443 2155 aa14.82□□□□□ -0.04
CTSA-213ENST00000606782 B4GALT3O60512 393 aa14.81□□□□□ -0.04
CTSA-213ENST00000606782 CLASP2O75122 1294 aaKnown RBP14.81□□□□□ -0.04
CTSA-213ENST00000606782 DDHD2O94830 711 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms