RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 MYMKA6NI61 221 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 K7ERI5 159 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 STAG3L1P0CL83 205 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 SKIP12755 728 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 ABCD1P33897 745 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 ZNF131P52739 623 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 DEFB103AP81534 67 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
CTSA-211ENST00000606066 DSC3Q14574 896 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 FAM187BQ17R55 369 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 DYMQ7RTS9 669 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 RTN4RL1Q86UN2 441 aaPredicted RBP15.73■□□□□ 0.11
CTSA-211ENST00000606066 MYCT1Q8N699 235 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 CCDC34Q96HJ3 373 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 FZD8Q9H461 694 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 LRFN2Q9ULH4 789 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 SCN5AQ14524 2016 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 ARID2Q68CP9 1835 aa15.73■□□□□ 0.11
CTSA-211ENST00000606066 EVPLQ92817 2033 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 MGEA5O60502 916 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 TSPAN1O60635 241 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 GJB5O95377 273 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 SLFN14P0C7P3 912 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 COL9A1P20849 921 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 SARSP49591 514 aaKnown RBP15.72■□□□□ 0.11
CTSA-211ENST00000606066 NDUFA8P51970 172 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 TPRNQ4KMQ1 711 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 TWF2Q6IBS0 349 aaKnown RBP15.72■□□□□ 0.11
CTSA-211ENST00000606066 NOTUMQ6P988 496 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 LINC01599Q8WXQ3 324 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 PPM1EQ8WY54 764 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 CCDC51Q96ER9 411 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 TRAIPQ9BWF2 469 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 TMEM134Q9H6X4 195 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 ELAC1Q9H777 363 aaKnown RBP15.72■□□□□ 0.11
CTSA-211ENST00000606066 SEL1LQ9UBV2 794 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 YBX2Q9Y2T7 364 aaKnown RBP15.72■□□□□ 0.11
CTSA-211ENST00000606066 PCDHB7Q9Y5E2 793 aa15.72■□□□□ 0.11
CTSA-211ENST00000606066 LOXHD1Q8IVV2 1947 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 A0A0U1RQF3 1178 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 C9IYK1 514 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 ACKR2O00590 384 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 TLL1O43897 1013 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 TRAK2O60296 914 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 UPP2O95045 317 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 PRKCBP05771 671 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 IDEP14735 1019 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 GAP43P17677 238 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 POU3F3P20264 500 aaPredicted RBP15.71■□□□□ 0.11
CTSA-211ENST00000606066 RAB27AP51159 221 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 FAM189BP81408 668 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 STRN3Q13033 797 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 PRPF4BQ13523 1007 aaKnown RBP15.71■□□□□ 0.11
CTSA-211ENST00000606066 TMEM132AQ24JP5 1023 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 NPAS4Q8IUM7 802 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 FAM178BQ8IXR5 827 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 CCDC65Q8IXS2 484 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 RAD9AQ99638 391 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 C7orf25Q9BPX7 421 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 KIFC3Q9BVG8 833 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 NKX2-4Q9H2Z4 354 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 ARHGAP28Q9P2N2 729 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 SERTAD1Q9UHV2 236 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 INSL6Q9Y581 213 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 PCDHA11Q9Y5I1 949 aa15.71■□□□□ 0.11
CTSA-211ENST00000606066 SLC16A4O15374 487 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 EOMESO95936 686 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 MYL1P05976 194 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 MAPTP10636 758 aaKnown RBP15.7■□□□□ 0.1
CTSA-211ENST00000606066 LIG1P18858 919 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 IGFBP4P22692 258 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 HOXA11P31270 313 aaPredicted RBP15.7■□□□□ 0.1
CTSA-211ENST00000606066 NCKAP1LP55160 1127 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 AMHR2Q16671 573 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 LONRF3Q496Y0 759 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 FAM117BQ6P1L5 589 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 CNNM4Q6P4Q7 775 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 TMEM87AQ8NBN3 555 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 TMEM161BQ8NDZ6 487 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 CNNM3Q8NE01 707 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 ADAMTS19Q8TE59 1207 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 STAMQ92783 540 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 DNAJC19Q96DA6 116 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 YME1L1Q96TA2 773 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 TRIM9Q9C026 710 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 CCDC113Q9H0I3 377 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 TMEM161AQ9NX61 479 aa15.7■□□□□ 0.1
CTSA-211ENST00000606066 ADGRA3Q8IWK6 1321 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 CNTNAP2Q9UHC6 1331 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 A0A1B0GUA9 196 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 RBAK-RBAKDNI3L0D1 243 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 K7ENM7 598 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 HOXA2O43364 376 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 ACTN4O43707 911 aaKnown RBP15.69■□□□□ 0.1
CTSA-211ENST00000606066 ZNF202O95125 648 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 BMP1P13497 986 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 ARF4P18085 180 aaPredicted RBP15.69■□□□□ 0.1
CTSA-211ENST00000606066 IBSPP21815 317 aaPredicted RBP15.69■□□□□ 0.1
CTSA-211ENST00000606066 AFMP43652 599 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms