RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 NFKBIZQ9BYH8 718 aa15.94■□□□□ 0.14
TUBE1-208ENST00000604743 CCDC169A6NNP5 214 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 HIP1RO75146 1068 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 ITGA4P13612 1032 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 DNAJB1P25685 340 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 LONP1P36776 959 aaKnown RBP15.93■□□□□ 0.14
TUBE1-208ENST00000604743 NAMPTP43490 491 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 DHX8Q14562 1220 aaKnown RBP15.93■□□□□ 0.14
TUBE1-208ENST00000604743 PPP2R5AQ15172 486 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 PTPAQ15257 358 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 NAALADL2Q58DX5 795 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 SPECC1Q5M775 1068 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 HYIQ5T013 277 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 GLB1LQ6UWU2 654 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 KIFAP3Q92845 792 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 AK8Q96MA6 479 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 ZNF558Q96NG5 402 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 MRPL9Q9BYD2 267 aaKnown RBP15.93■□□□□ 0.14
TUBE1-208ENST00000604743 TRIM6Q9C030 488 aaPredicted RBP15.93■□□□□ 0.14
TUBE1-208ENST00000604743 GBP3Q9H0R5 595 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 LMAN2LQ9H0V9 348 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 CSRNP2Q9H175 543 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 C2orf40Q9H1Z8 148 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 ZSCAN16Q9H4T2 348 aaPredicted RBP15.93■□□□□ 0.14
TUBE1-208ENST00000604743 NSUN3Q9H649 340 aaKnown RBP15.93■□□□□ 0.14
TUBE1-208ENST00000604743 PRMT7Q9NVM4 692 aaPredicted RBP15.93■□□□□ 0.14
TUBE1-208ENST00000604743 USP20Q9Y2K6 914 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 HES2Q9Y543 173 aa15.93■□□□□ 0.14
TUBE1-208ENST00000604743 TDRD15B5MCY1 1934 aaKnown RBP15.93■□□□□ 0.14
TUBE1-208ENST00000604743 SFI1A8K8P3 1242 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 NT5C1B-RDH14C9J2C7 533 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 OFD1O75665 1012 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 FGF18O76093 207 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 NPTXRO95502 500 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 PRKCBP05771 671 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 PLA2G4BP0C869 781 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 PEX3P56589 373 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 RNASELQ05823 741 aaKnown RBP15.92■□□□□ 0.14
TUBE1-208ENST00000604743 CAMK1Q14012 370 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 KARSQ15046 597 aaKnown RBP15.92■□□□□ 0.14
TUBE1-208ENST00000604743 FOXD4L6Q3SYB3 417 aaPredicted RBP15.92■□□□□ 0.14
TUBE1-208ENST00000604743 TMEM119Q4V9L6 283 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 NOMO2Q5JPE7 1267 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 CDCA2Q69YH5 1023 aaPredicted RBP15.92■□□□□ 0.14
TUBE1-208ENST00000604743 KCNT2Q6UVM3 1135 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 FOXD4L3Q6VB84 417 aaPredicted RBP15.92■□□□□ 0.14
TUBE1-208ENST00000604743 AGMOQ6ZNB7 445 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 C1orf186Q6ZWK4 172 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 MRPL10Q7Z7H8 261 aaKnown RBP15.92■□□□□ 0.14
TUBE1-208ENST00000604743 SMG8Q8ND04 991 aaKnown RBP15.92■□□□□ 0.14
TUBE1-208ENST00000604743 MICAL1Q8TDZ2 1067 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 HLA-CQ95604 372 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 USP28Q96RU2 1077 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 IGFLR1Q9H665 355 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 RSAD1Q9HA92 442 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 IPPQ9Y573 584 aa15.92■□□□□ 0.14
TUBE1-208ENST00000604743 TTLL13PA6NNM8 815 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 ZC3H11AO75152 810 aaKnown RBP eCLIP15.91■□□□□ 0.14
TUBE1-208ENST00000604743 NCLP19338 710 aaKnown RBP15.91■□□□□ 0.14
TUBE1-208ENST00000604743 IRS1P35568 1242 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 AFF1P51825 1210 aaKnown RBP15.91■□□□□ 0.14
TUBE1-208ENST00000604743 MRPS5P82675 430 aaKnown RBP15.91■□□□□ 0.14
TUBE1-208ENST00000604743 CACNB1Q02641 598 aaPredicted RBP15.91■□□□□ 0.14
TUBE1-208ENST00000604743 PRPF4BQ13523 1007 aaKnown RBP15.91■□□□□ 0.14
TUBE1-208ENST00000604743 MAPK6Q16659 721 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 SLC27A1Q6PCB7 646 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 SYT2Q8N9I0 419 aaPredicted RBP15.91■□□□□ 0.14
TUBE1-208ENST00000604743 CNNM3Q8NE01 707 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 URGCPQ8TCY9 931 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 ATXN2LQ8WWM7 1075 aaKnown RBP15.91■□□□□ 0.14
TUBE1-208ENST00000604743 CCDC51Q96ER9 411 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 CLIC6Q96NY7 704 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 FZD8Q9H461 694 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 TBC1D13Q9NVG8 400 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 COG5Q9UP83 839 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 PCDHGC5Q9Y5F6 944 aa15.91■□□□□ 0.14
TUBE1-208ENST00000604743 SPTBN5Q9NRC6 3674 aaKnown RBP15.91■□□□□ 0.14
TUBE1-208ENST00000604743 NPHP3-ACAD11A0A0J9YXS1 232 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 A0A1B0GUA9 196 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 DLL1O00548 723 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 POMCP01189 267 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 PLCG1P19174 1290 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 AKAP5P24588 427 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 ALDH7A1P49419 539 aaKnown RBP15.9■□□□□ 0.14
TUBE1-208ENST00000604743 SLC12A3P55017 1021 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 BCAR1P56945 870 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 DMP1Q13316 513 aaPredicted RBP15.9■□□□□ 0.14
TUBE1-208ENST00000604743 CSPP1Q1MSJ5 1256 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 TJAP1Q5JTD0 557 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 PPP4R3CPQ6ZMV5 832 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 DAW1Q8N136 415 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 EPSTI1Q96J88 318 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 PRIMPOLQ96LW4 560 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 DRC1Q96MC2 740 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 FAM193BQ96PV7 902 aaPredicted RBP15.9■□□□□ 0.14
TUBE1-208ENST00000604743 ASB2Q96Q27 587 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 NXF3Q9H4D5 531 aaKnown RBP15.9■□□□□ 0.14
TUBE1-208ENST00000604743 NRDE2Q9H7Z3 1164 aa15.9■□□□□ 0.14
TUBE1-208ENST00000604743 SPG21Q9NZD8 308 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms