RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 MRPL10Q7Z7H8 261 aaKnown RBP20.11■□□□□ 0.81
CCDC12-208ENST00000603885 C4orf32Q8N8J7 132 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 CNNM3Q8NE01 707 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 URGCPQ8TCY9 931 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 CCDC51Q96ER9 411 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 TMEM169Q96HH4 297 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 NFKBIZQ9BYH8 718 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 PRKAG3Q9UGI9 489 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 PER2O15055 1255 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 MBTPS2O43462 519 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 CD2BP2O95400 341 aaKnown RBP20.1■□□□□ 0.81
CCDC12-208ENST00000603885 MUTP22033 750 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 TOB1P50616 345 aaPredicted RBP20.1■□□□□ 0.81
CCDC12-208ENST00000603885 MBTD1Q05BQ5 628 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 SMAD2Q15796 467 aaKnown RBP20.1■□□□□ 0.81
CCDC12-208ENST00000603885 MCTP1Q6DN14 999 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 AGMOQ6ZNB7 445 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 TMC7Q7Z402 723 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 MSLNLQ96KJ4 702 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 TBC1D32Q96NH3 1257 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 RAB34Q9BZG1 259 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 RSAD1Q9HA92 442 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 CD320Q9NPF0 282 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 CLEC1BQ9P126 229 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 LRWD1Q9UFC0 647 aa20.1■□□□□ 0.81
CCDC12-208ENST00000603885 ARHGEF35A5YM69 484 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 NT5C1B-RDH14C9J2C7 533 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 GLP2RO95838 553 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 NCLP19338 710 aaKnown RBP20.09■□□□□ 0.81
CCDC12-208ENST00000603885 CCT6AP40227 531 aaKnown RBP20.09■□□□□ 0.81
CCDC12-208ENST00000603885 PTGDRQ13258 359 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 MAEAQ7L5Y9 396 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 C1QTNF1Q9BXJ1 281 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 NRDE2Q9H7Z3 1164 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 UBN1Q9NPG3 1134 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 GPRC5CQ9NQ84 441 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 BARX2Q9UMQ3 279 aaPredicted RBP20.09■□□□□ 0.81
CCDC12-208ENST00000603885 PCDHB6Q9Y5E3 794 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 STK24Q9Y6E0 443 aa20.09■□□□□ 0.81
CCDC12-208ENST00000603885 LRRIQ4A6NIV6 560 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 LAD1O00515 517 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 EYA4O95677 639 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 SRGAP2BP0DMP2 458 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 GJB2P29033 226 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 ZP2Q05996 745 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 COASYQ13057 564 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 PDIA5Q14554 519 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 SMC1AQ14683 1233 aaKnown RBP20.08■□□□□ 0.81
CCDC12-208ENST00000603885 BMS1Q14692 1282 aaKnown RBP20.08■□□□□ 0.81
CCDC12-208ENST00000603885 AMHR2Q16671 573 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 PADI6Q6TGC4 694 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 ADHFE1Q8IWW8 467 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 SMRP1Q8NCR6 262 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 CPB2Q96IY4 423 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 GBP3Q9H0R5 595 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 CSRNP2Q9H175 543 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 KANSL3Q9P2N6 904 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 IPPQ9Y573 584 aa20.08■□□□□ 0.81
CCDC12-208ENST00000603885 C5orf42Q9H799 3197 aa20.07■□□□□ 0.8
CCDC12-208ENST00000603885 HIDE1A8MVS5 230 aa20.07■□□□□ 0.8
CCDC12-208ENST00000603885 H3BQV1 296 aa20.07■□□□□ 0.8
CCDC12-208ENST00000603885 ITGA4P13612 1032 aa20.07■□□□□ 0.8
CCDC12-208ENST00000603885 ARF4P18085 180 aaPredicted RBP20.07■□□□□ 0.8
CCDC12-208ENST00000603885 IGSF22Q8N9C0 903 aa20.07■□□□□ 0.8
CCDC12-208ENST00000603885 SMG8Q8ND04 991 aaKnown RBP20.07■□□□□ 0.8
CCDC12-208ENST00000603885 FAM193BQ96PV7 902 aaPredicted RBP20.07■□□□□ 0.8
CCDC12-208ENST00000603885 POP1Q99575 1024 aaKnown RBP20.07■□□□□ 0.8
CCDC12-208ENST00000603885 EIF2AQ9BY44 585 aaKnown RBP20.07■□□□□ 0.8
CCDC12-208ENST00000603885 TRIM6Q9C030 488 aaPredicted RBP20.07■□□□□ 0.8
CCDC12-208ENST00000603885 GALTP07902 379 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 CYP11B2P19099 503 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 SLC11A1P49279 550 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 RILPL1Q5EBL4 403 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 TMEM173Q86WV6 379 aaPredicted RBP20.06■□□□□ 0.8
CCDC12-208ENST00000603885 ZNF280BQ86YH2 543 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 ZBTB8OSQ8IWT0 167 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 HACE1Q8IYU2 909 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 MRPL43Q8N983 215 aaKnown RBP20.06■□□□□ 0.8
CCDC12-208ENST00000603885 VN1R2Q8NFZ6 395 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 SNX29Q8TEQ0 813 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 IGSF21Q96ID5 467 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 EPHX3Q9H6B9 360 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.06■□□□□ 0.8
CCDC12-208ENST00000603885 PRMT7Q9NVM4 692 aaPredicted RBP20.06■□□□□ 0.8
CCDC12-208ENST00000603885 DNAJB4Q9UDY4 337 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 SMC3Q9UQE7 1217 aa20.06■□□□□ 0.8
CCDC12-208ENST00000603885 C2orf71A6NGG8 1288 aa20.05■□□□□ 0.8
CCDC12-208ENST00000603885 B4GALT5O43286 388 aa20.05■□□□□ 0.8
CCDC12-208ENST00000603885 CA8P35219 290 aa20.05■□□□□ 0.8
CCDC12-208ENST00000603885 PRPHP41219 470 aa20.05■□□□□ 0.8
CCDC12-208ENST00000603885 RBM10P98175 930 aaKnown RBP20.05■□□□□ 0.8
CCDC12-208ENST00000603885 ECM1Q16610 540 aa20.05■□□□□ 0.8
CCDC12-208ENST00000603885 CDCA2Q69YH5 1023 aaPredicted RBP20.05■□□□□ 0.8
CCDC12-208ENST00000603885 DTHD1Q6ZMT9 781 aa20.05■□□□□ 0.8
CCDC12-208ENST00000603885 DDX53Q86TM3 631 aaKnown RBP20.05■□□□□ 0.8
CCDC12-208ENST00000603885 VPS52Q8N1B4 723 aa20.05■□□□□ 0.8
CCDC12-208ENST00000603885 KHSRPQ92945 711 aaKnown RBP eCLIP20.05■□□□□ 0.8
CCDC12-208ENST00000603885 PRIMPOLQ96LW4 560 aa20.05■□□□□ 0.8
CCDC12-208ENST00000603885 C2orf40Q9H1Z8 148 aa20.05■□□□□ 0.8
CCDC12-208ENST00000603885 KIAA1024Q9UPX6 916 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms