RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 TLE2Q04725 743 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 CLN3Q13286 438 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 TMEM132BQ14DG7 1078 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 PTPN21Q16825 1174 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 FKBP15Q5T1M5 1219 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 PRAMEF18Q5VWM3 479 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 LDHAL6AQ6ZMR3 332 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 SPATS2Q86XZ4 545 aaKnown RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 SUGP1Q8IWZ8 645 aaKnown RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 FBXL6Q8N531 539 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 ANKRD13CQ8N6S4 541 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 SLC44A5Q8NCS7 719 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 RHPN1Q8TCX5 695 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 IWS1Q96ST2 819 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 ELAC2Q9BQ52 826 aaKnown RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 RTKNQ9BST9 563 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 PI4K2AQ9BTU6 479 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 DHRS4Q9BTZ2 278 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 NCOA5Q9HCD5 579 aaKnown RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 NGRNQ9NPE2 291 aaKnown RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 TMOD4Q9NZQ9 345 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 FEM1BQ9UK73 627 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 LUC7L2Q9Y383 392 aaKnown RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 DAAM1Q9Y4D1 1078 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 TRIOBPQ9H2D6 2365 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 MBLAC1A4D2B0 266 aaPredicted RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 PRR5-ARHGAP8B1AHC4 643 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 TAF4O00268 1085 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 GJB5O95377 273 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 STAU1O95793 577 aaKnown RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 FGBP02675 491 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 RARBP10826 455 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 MCM4P33991 863 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 BTDP43251 543 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 GYG1P46976 350 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 RCAN1P53805 252 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 WDR5P61964 334 aaKnown RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 ARHGAP8P85298 464 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 CENPCQ03188 943 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 NR5A1Q13285 461 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 GBX1Q14549 363 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 KRTAP21-3Q3LHN1 58 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 MINDY4Q4G0A6 757 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 FAM83BQ5T0W9 1011 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 TTBK2Q6IQ55 1244 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 XRRA1Q6P2D8 792 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 TTC17Q96AE7 1141 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 EAF2Q96CJ1 260 aaPredicted RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 MPP4Q96JB8 637 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 IPO9Q96P70 1041 aaKnown RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 TNKS2Q9H2K2 1166 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 CXorf56Q9H5V9 222 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 NSUN3Q9H649 340 aaKnown RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 ARHGEF10LQ9HCE6 1279 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 TMEM63CQ9P1W3 806 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 TAGLN3Q9UI15 199 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 ZNF180Q9UJW8 692 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 USP3Q9Y6I4 520 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 ZFP37Q9Y6Q3 630 aaPredicted RBP3.29□□□□□ -1.88
VCAM1-205ENST00000603679 COL1A2P08123 1366 aa3.29□□□□□ -1.88
VCAM1-205ENST00000603679 ZNF106Q9H2Y7 1883 aaKnown RBP3.28□□□□□ -1.88
VCAM1-205ENST00000603679 CEP192Q8TEP8 1941 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 A0A1W2PQH9 124 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 FAM221AA4D161 298 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 SOBPA7XYQ1 873 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 TCP10L2B9ZVM9 353 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 ANHXE9PGG2 379 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 CILPO75339 1184 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 RPS9P46781 194 aaKnown RBP3.28□□□□□ -1.88
VCAM1-205ENST00000603679 IDH3AP50213 366 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 SEPT6Q14141 434 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 ICE2Q659A1 982 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 NYAP1Q6ZVC0 841 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 FAM160B2Q86V87 743 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 SPATA5Q8NB90 893 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 RHBDD1Q8TEB9 315 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 CLDN23Q96B33 292 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 SUSD3Q96L08 255 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 TGS1Q96RS0 853 aaKnown RBP3.28□□□□□ -1.88
VCAM1-205ENST00000603679 MENTQ9BUN1 341 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 FBRSQ9HAH7 460 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 XPNPEP3Q9NQH7 507 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 TMPRSS4Q9NRS4 437 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 DACH1Q9UI36 760 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 MAFFQ9ULX9 164 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 CYP8B1Q9UNU6 501 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 RAD50Q92878 1312 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 MEIS3P2A8K0S8 358 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 IPO5O00410 1097 aaKnown RBP3.28□□□□□ -1.88
VCAM1-205ENST00000603679 GNAI3P08754 354 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 NAT2P11245 290 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 ACTN1P12814 892 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 GSPT1P15170 499 aaKnown RBP3.28□□□□□ -1.88
VCAM1-205ENST00000603679 TRIM14Q14142 442 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 ZMYM1Q5SVZ6 1142 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 KCNV1Q6PIU1 500 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 SERINC5Q86VE9 423 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 TMEM174Q8WUU8 243 aa3.28□□□□□ -1.88
VCAM1-205ENST00000603679 NECAB3Q96P71 396 aaPredicted RBP3.28□□□□□ -1.88
VCAM1-205ENST00000603679 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms