RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 SH2D3AQ9BRG2 576 aa10.71□□□□□ -0.69
VRK3-224ENST00000601849 RSAD1Q9HA92 442 aa10.71□□□□□ -0.69
VRK3-224ENST00000601849 NCOA5Q9HCD5 579 aaKnown RBP10.71□□□□□ -0.69
VRK3-224ENST00000601849 AGPAT5Q9NUQ2 364 aa10.71□□□□□ -0.69
VRK3-224ENST00000601849 FAM86C1Q9NVL1 165 aa10.71□□□□□ -0.69
VRK3-224ENST00000601849 FBXL21Q9UKT6 434 aa10.71□□□□□ -0.69
VRK3-224ENST00000601849 DMDP11532 3685 aa10.71□□□□□ -0.7
VRK3-224ENST00000601849 PROB1E7EW31 1015 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 TBX3O15119 743 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 ADH1AP07327 375 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 WEE2P0C1S8 567 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 ITGA4P13612 1032 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 AXLP30530 894 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 AK2P54819 239 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 FOXK2Q01167 660 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 PPP2R5CQ13362 524 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 TFDP1Q14186 410 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 MXD4Q14582 209 aaPredicted RBP10.7□□□□□ -0.7
VRK3-224ENST00000601849 PPP4R3AQ6IN85 833 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 MRPL10Q7Z7H8 261 aaKnown RBP10.7□□□□□ -0.7
VRK3-224ENST00000601849 NEK8Q86SG6 692 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 KSR1Q8IVT5 923 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 SLFN12Q8IYM2 578 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 PIAS4Q8N2W9 510 aaPredicted RBP10.7□□□□□ -0.7
VRK3-224ENST00000601849 DAGLBQ8NCG7 672 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 FLCNQ8NFG4 579 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 ETNPPLQ8TBG4 499 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 WASF1Q92558 559 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 MBOAT7Q96N66 472 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 KLHL5Q96PQ7 755 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 COLEC11Q9BWP8 271 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 TRIM6Q9C030 488 aaPredicted RBP10.7□□□□□ -0.7
VRK3-224ENST00000601849 IFT122Q9HBG6 1241 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 ZSWIM6Q9HCJ5 1215 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 IGSF9Q9P2J2 1179 aa10.7□□□□□ -0.7
VRK3-224ENST00000601849 ZNF318Q5VUA4 2279 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 TMEM150BA6NC51 233 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 NRP1O14786 923 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 CCNT1O60563 726 aaKnown RBP10.69□□□□□ -0.7
VRK3-224ENST00000601849 STBD1O95210 358 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 PDGFBP01127 241 aaPredicted RBP10.69□□□□□ -0.7
VRK3-224ENST00000601849 POMCP01189 267 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 SOD2P04179 222 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 SSBP05455 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
VRK3-224ENST00000601849 ASGR2P07307 311 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 NCLP19338 710 aaKnown RBP10.69□□□□□ -0.7
VRK3-224ENST00000601849 YWHABP31946 246 aaKnown RBP10.69□□□□□ -0.7
VRK3-224ENST00000601849 OR1G1P47890 313 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 SLC11A1P49279 550 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 CLCN4P51793 760 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 LAMTOR4Q0VGL1 99 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 EPHA7Q15375 998 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 PTPN14Q15678 1187 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 INF2Q27J81 1249 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 XKR9Q5GH70 373 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 PLA2G4FQ68DD2 849 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 NOTUMQ6P988 496 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 B3GNT9Q6UX72 402 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 ZNF280BQ86YH2 543 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 C4orf19Q8IY42 314 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 NXPE3Q969Y0 559 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 TMEM143Q96AN5 459 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 CCDC51Q96ER9 411 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 CEP89Q96ST8 783 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 RTP3Q9BQQ7 232 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 TM6SF1Q9BZW5 370 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 ZSWIM4Q9H7M6 989 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 PIDD1Q9HB75 910 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 BRMS1Q9HCU9 246 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 DNAJB4Q9UDY4 337 aa10.69□□□□□ -0.7
VRK3-224ENST00000601849 CCDC195A0A1B0GUA6 201 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 M0R2N6 131 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 C2CD2LO14523 706 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 EDIL3O43854 480 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 C1RP00736 705 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 CNPP09543 421 aaKnown RBP10.68□□□□□ -0.7
VRK3-224ENST00000601849 NPEPPSP55786 919 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 CREMQ03060 361 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 STK3Q13188 491 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 AGMOQ6ZNB7 445 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 TMEM173Q86WV6 379 aaPredicted RBP10.68□□□□□ -0.7
VRK3-224ENST00000601849 TMEM105Q8N8V8 129 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 RNF149Q8NC42 400 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 CMASQ8NFW8 434 aaPredicted RBP10.68□□□□□ -0.7
VRK3-224ENST00000601849 HDAC7Q8WUI4 952 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 NKD2Q969F2 451 aaPredicted RBP10.68□□□□□ -0.7
VRK3-224ENST00000601849 RPS6KC1Q96S38 1066 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 MTRQ99707 1265 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 DHX33Q9H6R0 707 aaKnown RBP10.68□□□□□ -0.7
VRK3-224ENST00000601849 KCNK12Q9HB15 430 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.68□□□□□ -0.7
VRK3-224ENST00000601849 PDRG1Q9NUG6 133 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 CDH22Q9UJ99 828 aa10.68□□□□□ -0.7
VRK3-224ENST00000601849 INO80B-WBP1J3KQ70 363 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 EML1O00423 815 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 DDHD2O94830 711 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 GLUD1P00367 558 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 AOC1P19801 751 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 GBP2P32456 591 aaPredicted RBP10.67□□□□□ -0.7
VRK3-224ENST00000601849 NBL1P41271 181 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms