RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 LAMC2Q13753 1193 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 PCBP1Q15365 356 aaKnown RBP eCLIP10.63□□□□□ -0.71
FARP1-235ENST00000601656 INO80DQ53TQ3 878 aaPredicted RBP10.63□□□□□ -0.71
FARP1-235ENST00000601656 ACBD5Q5T8D3 534 aaPredicted RBP10.63□□□□□ -0.71
FARP1-235ENST00000601656 CXCL17Q6UXB2 119 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 MAMDC4Q6UXC1 1216 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 ADAMTSL4Q6UY14 1074 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 PDZD3Q86UT5 571 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 HERC6Q8IVU3 1022 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 LINC00528Q8N1L1 170 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 CNTD1Q8N815 330 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 PRSS33Q8NF86 280 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 SSH3Q8TE77 659 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 DDX11Q96FC9 970 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 GPAMQ9HCL2 828 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 TRIM39Q9HCM9 518 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 CACNA2D2Q9NY47 1150 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 REV1Q9UBZ9 1251 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 TAGLN3Q9UI15 199 aa10.63□□□□□ -0.71
FARP1-235ENST00000601656 PTPRZ1P23471 2315 aaPredicted RBP10.63□□□□□ -0.71
FARP1-235ENST00000601656 COL4A4P53420 1690 aaPredicted RBP10.63□□□□□ -0.71
FARP1-235ENST00000601656 ZFHX2Q9C0A1 2572 aaPredicted RBP10.63□□□□□ -0.71
FARP1-235ENST00000601656 CTAGE5O15320 804 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 WIPF1O43516 503 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 B4GALT4O60513 344 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 CABYRO75952 493 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 UPP2O95045 317 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 UQCRFS1P1P0C7P4 283 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 FGFR1P11362 822 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 PLCD1P51178 756 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 NEK4P51957 841 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 ATP8B2P98198 1209 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 GDPD5Q8WTR4 605 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 TTC1Q99614 292 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 ABHD16BQ9H3Z7 469 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 FBRSQ9HAH7 460 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 SWAP70Q9UH65 585 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 ADAMTS5Q9UNA0 930 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 MYH7P12883 1935 aa10.62□□□□□ -0.71
FARP1-235ENST00000601656 GRIN2DO15399 1336 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 VSTM5A8MXK1 200 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 FBXO21O94952 628 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 F11P03951 625 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 RHOQP17081 205 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 INSM1Q01101 510 aaPredicted RBP10.61□□□□□ -0.71
FARP1-235ENST00000601656 SETDB1Q15047 1291 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 BBS9Q3SYG4 887 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 EFHC2Q5JST6 749 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 CEP85Q6P2H3 762 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 FIGNL1Q6PIW4 674 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 TMTC2Q8N394 836 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 POP1Q99575 1024 aaKnown RBP10.61□□□□□ -0.71
FARP1-235ENST00000601656 SEZ6LQ9BYH1 1024 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 OSGEPQ9NPF4 335 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 LUC7LQ9NQ29 371 aaKnown RBP10.61□□□□□ -0.71
FARP1-235ENST00000601656 USP25Q9UHP3 1055 aa10.61□□□□□ -0.71
FARP1-235ENST00000601656 TNKSO95271 1327 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 TBX3O15119 743 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 ASLP04424 464 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 CYP7A1P22680 504 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 BDNFP23560 247 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 COPB2P35606 906 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 HTR3AP46098 478 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 CDK8P49336 464 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 NKX3-2P78367 333 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 SEPT7Q16181 437 aaKnown RBP10.6□□□□□ -0.71
FARP1-235ENST00000601656 PCGF5Q86SE9 256 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 MIGA1Q8NAN2 632 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 SARGQ9BW04 601 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.6□□□□□ -0.71
FARP1-235ENST00000601656 UPF3BQ9BZI7 483 aaKnown RBP10.6□□□□□ -0.71
FARP1-235ENST00000601656 FTOQ9C0B1 505 aaKnown RBP eCLIP10.6□□□□□ -0.71
FARP1-235ENST00000601656 IFT22Q9H7X7 185 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 VCPKMTQ9H867 229 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 SUGCTQ9HAC7 445 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 FBXO28Q9NVF7 368 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 FBXO9Q9UK97 447 aaPredicted RBP10.6□□□□□ -0.71
FARP1-235ENST00000601656 DDX19BQ9UMR2 479 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 CORINQ9Y5Q5 1042 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 TET1Q8NFU7 2136 aa10.6□□□□□ -0.71
FARP1-235ENST00000601656 PTPRSQ13332 1948 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 LCHNA4D1U4 455 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 ANKRD34BA5PLL1 514 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 H3BQ06 376 aaPredicted RBP10.59□□□□□ -0.71
FARP1-235ENST00000601656 VWA5AO00534 786 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 WDR46O15213 610 aaKnown RBP10.59□□□□□ -0.71
FARP1-235ENST00000601656 ATXN7O15265 892 aaPredicted RBP10.59□□□□□ -0.71
FARP1-235ENST00000601656 ZEB2O60315 1214 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 CYP2C9P11712 490 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 SELPP16109 830 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 PSMC6P62333 389 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 PPP2R2AP63151 447 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 TMPRSS15P98073 1019 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 ATP11AP98196 1134 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 TNFAIP2Q03169 654 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 G3BP1Q13283 466 aaKnown RBP eCLIP10.59□□□□□ -0.71
FARP1-235ENST00000601656 LBRQ14739 615 aaKnown RBP10.59□□□□□ -0.71
FARP1-235ENST00000601656 TTC39AQ5SRH9 613 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 SIAH1Q8IUQ4 282 aa10.59□□□□□ -0.71
FARP1-235ENST00000601656 PJA1Q8NG27 643 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms