RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 LILRB3O75022 631 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 POMCP01189 267 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 URODP06132 367 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 CYP3A4P08684 503 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 SFPQP23246 707 aaKnown RBP eCLIP11.2□□□□□ -0.62
HIF3A-219ENST00000600879 GPC5P78333 572 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 SETQ01105 290 aaPredicted RBP11.2□□□□□ -0.62
HIF3A-219ENST00000600879 APOA5Q6Q788 366 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 CATSPER4Q7RTX7 472 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 PALB2Q86YC2 1186 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 RHPN2Q8IUC4 686 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 URGCPQ8TCY9 931 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 CRYGNQ8WXF5 182 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 STAMQ92783 540 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 ZNF707Q96C28 371 aaPredicted RBP11.2□□□□□ -0.62
HIF3A-219ENST00000600879 NLRP4Q96MN2 994 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 FAM193BQ96PV7 902 aaPredicted RBP11.2□□□□□ -0.62
HIF3A-219ENST00000600879 PIDD1Q9HB75 910 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 CHST12Q9NRB3 414 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 RBM28Q9NW13 759 aaKnown RBP11.2□□□□□ -0.62
HIF3A-219ENST00000600879 EPS15L1Q9UBC2 864 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 BRPF3Q9ULD4 1205 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 NAP1L2Q9ULW6 460 aaPredicted RBP11.2□□□□□ -0.62
HIF3A-219ENST00000600879 FAN1Q9Y2M0 1017 aa11.2□□□□□ -0.62
HIF3A-219ENST00000600879 MAP1BP46821 2468 aaKnown RBP11.19□□□□□ -0.62
HIF3A-219ENST00000600879 MYH9P35579 1960 aaKnown RBP11.19□□□□□ -0.62
HIF3A-219ENST00000600879 GOLGA8AA7E2F4 631 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 GOLGA8BA8MQT2 603 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 NRP1O14786 923 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 GLUD1P00367 558 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 ADH1AP07327 375 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 SKIP12755 728 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 NTHL1P78549 312 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 HTR4Q13639 388 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 UBXN2BQ14CS0 331 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 KIAA0319Q5VV43 1072 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 PHLDB3Q6NSJ2 640 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 AGMOQ6ZNB7 445 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 SGMS1Q86VZ5 419 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 CMASQ8NFW8 434 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-219ENST00000600879 RPS6KC1Q96S38 1066 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 LSG1Q9H089 658 aaKnown RBP11.19□□□□□ -0.62
HIF3A-219ENST00000600879 UNC45AQ9H3U1 944 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 SUCLA2Q9P2R7 463 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-219ENST00000600879 SMG5Q9UPR3 1016 aaKnown RBP11.19□□□□□ -0.62
HIF3A-219ENST00000600879 PCDHB2Q9Y5E7 798 aa11.19□□□□□ -0.62
HIF3A-219ENST00000600879 MSH4O15457 936 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 ZBTB43O43298 467 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 LAMTOR5O43504 91 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 GAS7O60861 476 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 SOD2P04179 222 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 ALDH2P05091 517 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 LAMP2P13473 410 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 TGM1P22735 817 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 CDC27P30260 824 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 OR1G1P47890 313 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 RAB27AP51159 221 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 COL9A2Q14055 689 aaPredicted RBP11.18□□□□□ -0.62
HIF3A-219ENST00000600879 TARBP2Q15633 366 aaKnown RBP11.18□□□□□ -0.62
HIF3A-219ENST00000600879 PARM1Q6UWI2 310 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 REXO1Q8N1G1 1221 aaKnown RBP11.18□□□□□ -0.62
HIF3A-219ENST00000600879 ZNF710Q8N1W2 664 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 RABGGTAQ92696 567 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 FGF14Q92915 247 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 LENG9Q96B70 501 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 PGBD4Q96DM1 585 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 HERC2P3Q9BVR0 1158 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 TRAIPQ9BWF2 469 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 GLT8D2Q9H1C3 349 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 RSAD1Q9HA92 442 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 MARCH5Q9NX47 278 aa11.18□□□□□ -0.62
HIF3A-219ENST00000600879 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.18□□□□□ -0.62
HIF3A-219ENST00000600879 KLF18A0A0U1RQI7 1052 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 CARNS1A5YM72 827 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 ANHXE9PGG2 379 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 hCG_1984214I3L0E3 225 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 ZNF623O75123 536 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 CDC45O75419 566 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 ADRB1P08588 477 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-219ENST00000600879 RPL17P18621 184 aaKnown RBP11.17□□□□□ -0.62
HIF3A-219ENST00000600879 GLUD2P49448 558 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 DNM2P50570 870 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 SPEM2Q0P670 501 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 PPM1JQ5JR12 505 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 PLA2G4FQ68DD2 849 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 ZNF713Q8N859 430 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-219ENST00000600879 ATRIPQ8WXE1 791 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 TMEM175Q9BSA9 504 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 TEKT3Q9BXF9 490 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 INO80BQ9C086 356 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-219ENST00000600879 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-219ENST00000600879 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-219ENST00000600879 USP24Q9UPU5 2620 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 CHD8Q9HCK8 2581 aa11.17□□□□□ -0.62
HIF3A-219ENST00000600879 CACNA1IQ9P0X4 2223 aa11.16□□□□□ -0.62
HIF3A-219ENST00000600879 FAM170BA6NMN3 283 aa11.16□□□□□ -0.62
HIF3A-219ENST00000600879 DDX11L8A8MPP1 907 aa11.16□□□□□ -0.62
HIF3A-219ENST00000600879 GAS2O43903 313 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms