RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 CNKSR1Q969H4 720 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 ZNF570Q96NI8 536 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 AGPAT1Q99943 283 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 INTS2Q9H0H0 1204 aaKnown RBP20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 WNT8AQ9H1J5 351 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 GAKO14976 1311 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 TMEM120BA0PK00 339 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 LIN7AO14910 233 aaPredicted RBP20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 KRT16P08779 473 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 ATP11AP98196 1134 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 CALCOCO2Q13137 446 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 CTTNQ14247 550 aaKnown RBP20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 LRRC14Q15048 493 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 ZNF568Q3ZCX4 644 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 ASRGL1Q7L266 308 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 CCDC24Q8N4L8 307 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 KCTD17Q8N5Z5 321 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 KRT35Q92764 455 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 BHMT2Q9H2M3 363 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 SLC5A4Q9NY91 659 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 GGT7Q9UJ14 662 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 ZMYM2Q9UBW7 1377 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 EYA4O95677 639 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 MYCNP04198 464 aaPredicted RBP20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 SKIV2L2P42285 1042 aaKnown RBP20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 CCNG1P51959 295 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 GRAPQ13588 217 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 PRR16Q569H4 304 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 GRAPLQ8TC17 118 aaPredicted RBP20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 CKAP2Q8WWK9 683 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 ANKRD27Q96NW4 1050 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 RUSC1Q9BVN2 902 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 TRIM7Q9C029 511 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 THRAP3Q9Y2W1 955 aaKnown RBP20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 CNTNAP4Q9C0A0 1308 aa20.05■□□□□ 0.8
ARHGEF1-221ENST00000600387 PEX5P50542 639 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 ARHGAP4P98171 946 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 GRIK3Q13003 919 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 SLC15A2Q16348 729 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 PALB2Q86YC2 1186 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 CLEC10AQ8IUN9 316 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 ZDHHC14Q8IZN3 488 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 MGARPQ8TDB4 240 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 CRYGNQ8WXF5 182 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 FAM20AQ96MK3 541 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 CD209Q9NNX6 404 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 PRKAG3Q9UGI9 489 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 RABGAP1Q9Y3P9 1069 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 COL16A1Q07092 1604 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 WFS1O76024 890 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 ATP2A2P16615 1042 aaKnown RBP20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 GPC5P78333 572 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 LONRF1Q17RB8 773 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 CBWD6Q4V339 395 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 CBWD3Q5JTY5 395 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 CBWD5Q5RIA9 395 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 VSTM1Q6UX27 236 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 PRCCQ92733 491 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 VTI1AQ96AJ9 217 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 SPDL1Q96EA4 605 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 POLR3CQ9BUI4 534 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 CDC42EP4Q9H3Q1 356 aaKnown RBP20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 SLC24A3Q9HC58 644 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP40Q9NVE5 1235 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 FRMD4BQ9Y2L6 1034 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 PCDHA1Q9Y5I3 950 aa20.04■□□□□ 0.8
ARHGEF1-221ENST00000600387 BCRP11274 1271 aa20.03■□□□□ 0.8
ARHGEF1-221ENST00000600387 PDE6BP35913 854 aa20.03■□□□□ 0.8
ARHGEF1-221ENST00000600387 MARCKSL1P49006 195 aa20.03■□□□□ 0.8
ARHGEF1-221ENST00000600387 MYL7Q01449 175 aa20.03■□□□□ 0.8
ARHGEF1-221ENST00000600387 ARHGAP44Q17R89 818 aa20.03■□□□□ 0.8
ARHGEF1-221ENST00000600387 KCTD1Q719H9 257 aa20.03■□□□□ 0.8
ARHGEF1-221ENST00000600387 CCDC25Q86WR0 208 aa20.03■□□□□ 0.8
ARHGEF1-221ENST00000600387 SLC13A5Q86YT5 568 aaPredicted RBP20.03■□□□□ 0.8
ARHGEF1-221ENST00000600387 C12orf50Q8NA57 414 aaPredicted RBP20.03■□□□□ 0.8
ARHGEF1-221ENST00000600387 UBE4BO95155 1302 aa20.03■□□□□ 0.8
ARHGEF1-221ENST00000600387 FAM13AO94988 1023 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 LUC7L3O95232 432 aaKnown RBP20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 FTLP02792 175 aaPredicted RBP20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 CCNB1P14635 433 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 IL1R1P14778 569 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 COMTP21964 271 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 QRICH1Q2TAL8 776 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 RNF43Q68DV7 783 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 FITM2Q8N6M3 262 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 ARMC2Q8NEN0 867 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 WHRNQ9P202 907 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 STK38LQ9Y2H1 464 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 GREB1LQ9C091 1923 aaPredicted RBP20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 ANKRD63C9JTQ0 380 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 SMNDC1O75940 238 aaKnown RBP eCLIP20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 ECEL1O95672 775 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 GCKP35557 465 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 CCDC15Q0P6D6 951 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 RRP1BQ14684 758 aaKnown RBP20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 NFIXQ14938 502 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 RINT1Q6NUQ1 792 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 ERICH1Q86X53 443 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 KIF2BQ8N4N8 673 aa20.02■□□□□ 0.8
ARHGEF1-221ENST00000600387 RAB3IPQ96QF0 476 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms