RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 ZIC5Q96T25 663 aa16.52■□□□□ 0.23
HIF3A-218ENST00000600383 NUCKS1Q9H1E3 243 aaKnown RBP16.52■□□□□ 0.23
HIF3A-218ENST00000600383 TLL2Q9Y6L7 1015 aa16.52■□□□□ 0.23
HIF3A-218ENST00000600383 UQCRHLA0A096LP55 91 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 GTPBP10A4D1E9 387 aaKnown RBP16.51■□□□□ 0.23
HIF3A-218ENST00000600383 HBP1O60381 514 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 TUBB4AP04350 444 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 UQCRHP07919 91 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 CYP2B6P20813 491 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 MATR3P43243 847 aaKnown RBP eCLIP16.51■□□□□ 0.23
HIF3A-218ENST00000600383 CHMP4BP1P59074 171 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 KRT83P78385 493 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 MYL7Q01449 175 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 PPP3CAQ08209 521 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 MAP2K5Q13163 448 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
HIF3A-218ENST00000600383 SPA17Q15506 151 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 SLC9C1Q4G0N8 1177 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 IER5Q5VY09 327 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 DPY19L2P1Q6NXN4 242 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 EFCAB12Q6NXP0 572 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 C17orf99Q6UX52 265 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 KIAA1328Q86T90 577 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 PPTC7Q8NI37 304 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 PLEKHO2Q8TD55 490 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 WDR24Q96S15 920 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 POP1Q99575 1024 aaKnown RBP16.51■□□□□ 0.23
HIF3A-218ENST00000600383 FAM213AQ9BRX8 229 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 ZFYVE28Q9HCC9 887 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 GUCA1BQ9UMX6 200 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 ADGRA2Q96PE1 1338 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 FAM155AB1AL88 458 aaPredicted RBP16.51■□□□□ 0.23
HIF3A-218ENST00000600383 GJB1P08034 283 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 INSRRP14616 1297 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 ABCD1P33897 745 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 LAMTOR4Q0VGL1 99 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 DUSP28Q4G0W2 176 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 MORN1Q5T089 497 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 RNF149Q8NC42 400 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 TCP11Q8WWU5 503 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 PSPC1Q8WXF1 523 aaKnown RBP16.51■□□□□ 0.23
HIF3A-218ENST00000600383 CCDC102AQ96A19 550 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 ZBTB45Q96K62 511 aaPredicted RBP16.51■□□□□ 0.23
HIF3A-218ENST00000600383 TARS2Q9BW92 718 aaKnown RBP16.51■□□□□ 0.23
HIF3A-218ENST00000600383 SIX2Q9NPC8 291 aa16.51■□□□□ 0.23
HIF3A-218ENST00000600383 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.51■□□□□ 0.23
HIF3A-218ENST00000600383 SUCLA2Q9P2R7 463 aaPredicted RBP16.51■□□□□ 0.23
HIF3A-218ENST00000600383 EIF3CLB5ME19 914 aaKnown RBP16.5■□□□□ 0.23
HIF3A-218ENST00000600383 KIF5CO60282 957 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 PPFIA4O75335 1185 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 CASQ1P31415 396 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 KIF11P52732 1056 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 CRHR2Q13324 411 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 CCL14Q16627 93 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 HGSNATQ68CP4 663 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 EXOC8Q8IYI6 725 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 GPD1LQ8N335 351 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 OR6J1Q8NGC5 347 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 EIF3CQ99613 913 aaKnown RBP16.5■□□□□ 0.23
HIF3A-218ENST00000600383 ZCCHC17Q9NP64 241 aaKnown RBP16.5■□□□□ 0.23
HIF3A-218ENST00000600383 FLRT1Q9NZU1 646 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 ANKFY1Q9P2R3 1169 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 TRIM10Q9UDY6 481 aa16.5■□□□□ 0.23
HIF3A-218ENST00000600383 ADCY6O43306 1168 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 ADCY3O60266 1144 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 LRRN2O75325 713 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
HIF3A-218ENST00000600383 CYP2C19P33261 490 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 CLCN3P51790 818 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 TNFAIP2Q03169 654 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 KLHL30Q0D2K2 578 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 CETN1Q12798 172 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 MXD4Q14582 209 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-218ENST00000600383 ZNF569Q5MCW4 686 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 IQSEC1Q6DN90 963 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 SYN2Q92777 582 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-218ENST00000600383 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.49■□□□□ 0.23
HIF3A-218ENST00000600383 INTS2Q9H0H0 1204 aaKnown RBP16.49■□□□□ 0.23
HIF3A-218ENST00000600383 AJAP1Q9UKB5 411 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-218ENST00000600383 PPME1Q9Y570 386 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 H3BRB1 525 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 MAPK13O15264 365 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 FANCGO15287 622 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 DYNC1LI2O43237 492 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-218ENST00000600383 SERPING1P05155 500 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 GARTP22102 1010 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 ACOT2P49753 483 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 GFPT1Q06210 699 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-218ENST00000600383 SREBF2Q12772 1141 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 ASIC2Q16515 512 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 C1orf220Q5T0J3 134 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 CCDC122Q5T0U0 273 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 IQCEQ6IPM2 695 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 MYRIPQ8NFW9 859 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 NLRP4Q96MN2 994 aa16.49■□□□□ 0.23
HIF3A-218ENST00000600383 TUT1Q9H6E5 874 aaKnown RBP16.49■□□□□ 0.23
HIF3A-218ENST00000600383 IGKV6-21A0A0C4DH24 114 aa16.48■□□□□ 0.23
HIF3A-218ENST00000600383 TNPO2O14787 897 aaKnown RBP16.48■□□□□ 0.23
HIF3A-218ENST00000600383 ZNF263O14978 683 aa16.48■□□□□ 0.23
HIF3A-218ENST00000600383 PNMA6AP0CW24 399 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms