RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 C9IYK1 514 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 TRAK2O60296 914 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 PPP1R37O75864 691 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 PRKCBP05771 671 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 IBSPP21815 317 aaPredicted RBP13.04□□□□□ -0.32
FARP1-230ENST00000600380 SFPQP23246 707 aaKnown RBP eCLIP13.04□□□□□ -0.32
FARP1-230ENST00000600380 HOXD13P35453 343 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 FAM189BP81408 668 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 FAM187BQ17R55 369 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 UNC13DQ70J99 1090 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 ZNF720Q7Z2F6 126 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 ZBTB8OSQ8IWT0 167 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 APBB2Q92870 758 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 ZBTB45Q96K62 511 aaPredicted RBP13.04□□□□□ -0.32
FARP1-230ENST00000600380 GBP4Q96PP9 640 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 PYM1Q9BRP8 204 aaKnown RBP13.04□□□□□ -0.32
FARP1-230ENST00000600380 TARS2Q9BW92 718 aaKnown RBP13.04□□□□□ -0.32
FARP1-230ENST00000600380 EIF2AQ9BY44 585 aaKnown RBP13.04□□□□□ -0.32
FARP1-230ENST00000600380 TMEM134Q9H6X4 195 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 RGS18Q9NS28 235 aa13.04□□□□□ -0.32
FARP1-230ENST00000600380 PIN4Q9Y237 131 aaKnown RBP13.04□□□□□ -0.32
FARP1-230ENST00000600380 MEIS3P2A8K0S8 358 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 TISP43B9A030 160 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 K7ERI5 159 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 ACKR2O00590 384 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 ABLIM1O14639 778 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 BAIAP3O94812 1187 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 ATF7P17544 494 aaPredicted RBP13.03□□□□□ -0.32
FARP1-230ENST00000600380 GAP43P17677 238 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 GATMP50440 423 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 EFNA5P52803 228 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 RABGGTBP53611 331 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 AMPD3Q01432 767 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 MAPK6Q16659 721 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 KMT5BQ4FZB7 885 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 FAM117BQ6P1L5 589 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 FAM178BQ8IXR5 827 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 TDHQ8IZJ6 230 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 TIGD1Q96MW7 591 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 C2orf40Q9H1Z8 148 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 PDZD7Q9H5P4 517 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 RNF19AQ9NV58 838 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 LARSQ9P2J5 1176 aaKnown RBP13.03□□□□□ -0.32
FARP1-230ENST00000600380 TBX20Q9UMR3 447 aa13.03□□□□□ -0.32
FARP1-230ENST00000600380 A0A1B0GUA9 196 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 ANKRD63C9JTQ0 380 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 K7ENM7 598 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 PRPF6O94906 941 aaKnown RBP13.02□□□□□ -0.33
FARP1-230ENST00000600380 ARHGEF15O94989 841 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 RPN1P04843 607 aaKnown RBP13.02□□□□□ -0.33
FARP1-230ENST00000600380 ACTN1P12814 892 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 MYOGP15173 224 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 MCM4P33991 863 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 PBX2P40425 430 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 SMTNP53814 917 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 GTF2BQ00403 316 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 STK4Q13043 487 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 PRPF4BQ13523 1007 aaKnown RBP13.02□□□□□ -0.33
FARP1-230ENST00000600380 POSTNQ15063 836 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 SLC39A4Q6P5W5 647 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 EPM2AIP1Q7L775 607 aaPredicted RBP13.02□□□□□ -0.33
FARP1-230ENST00000600380 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
FARP1-230ENST00000600380 ECHDC2Q86YB7 292 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 CCDC65Q8IXS2 484 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 MYOCDQ8IZQ8 938 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 KCNN1Q92952 543 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 ACO2Q99798 780 aaKnown RBP13.02□□□□□ -0.33
FARP1-230ENST00000600380 FTHL17Q9BXU8 183 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 LRRC27Q9C0I9 530 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 ST6GALNAC4Q9H4F1 302 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 MRPL44Q9H9J2 332 aaKnown RBP13.02□□□□□ -0.33
FARP1-230ENST00000600380 PTPRHQ9HD43 1115 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 CHST12Q9NRB3 414 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 OLFML3Q9NRN5 406 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 PRMT7Q9NVM4 692 aaPredicted RBP13.02□□□□□ -0.33
FARP1-230ENST00000600380 HES2Q9Y543 173 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 SLC4A7Q9Y6M7 1214 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 CNTNAP2Q9UHC6 1331 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 COL4A6Q14031 1691 aa13.02□□□□□ -0.33
FARP1-230ENST00000600380 SOX1O00570 391 aaPredicted RBP13.01□□□□□ -0.33
FARP1-230ENST00000600380 ERLIN2O94905 339 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 UPP2O95045 317 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 NPTXRO95502 500 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 ATP2A2P16615 1042 aaKnown RBP13.01□□□□□ -0.33
FARP1-230ENST00000600380 SARSP49591 514 aaKnown RBP13.01□□□□□ -0.33
FARP1-230ENST00000600380 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 TWF2Q6IBS0 349 aaKnown RBP13.01□□□□□ -0.33
FARP1-230ENST00000600380 SLC24A5Q71RS6 500 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 HERC6Q8IVU3 1022 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 KIAA0895Q8NCT3 520 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 SMG8Q8ND04 991 aaKnown RBP13.01□□□□□ -0.33
FARP1-230ENST00000600380 SPATA20Q8TB22 786 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 LPPQ93052 612 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 TOP1MTQ969P6 601 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 CXCL16Q9H2A7 254 aa13.01□□□□□ -0.33
FARP1-230ENST00000600380 SLC39A2Q9NP94 309 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms