RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TMEM175Q9BSA9 504 aa19.23■□□□□ 0.67
SMG9-210ENST00000600097 VN1R3Q9BXE9 311 aa19.23■□□□□ 0.67
SMG9-210ENST00000600097 SLKQ9H2G2 1235 aaPredicted RBP19.23■□□□□ 0.67
SMG9-210ENST00000600097 MFSD1Q9H3U5 465 aa19.23■□□□□ 0.67
SMG9-210ENST00000600097 RSAD1Q9HA92 442 aa19.23■□□□□ 0.67
SMG9-210ENST00000600097 ZFHX2Q9C0A1 2572 aaPredicted RBP19.22■□□□□ 0.67
SMG9-210ENST00000600097 PROB1E7EW31 1015 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 EML1O00423 815 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 SLC37A4O43826 429 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 GAS2O43903 313 aaKnown RBP19.22■□□□□ 0.67
SMG9-210ENST00000600097 P4HBP07237 508 aaKnown RBP19.22■□□□□ 0.67
SMG9-210ENST00000600097 GCFC2P16383 781 aaKnown RBP19.22■□□□□ 0.67
SMG9-210ENST00000600097 KLRC2P26717 231 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 RFC5P40937 340 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 NPEPPSP55786 919 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 LETM2Q2VYF4 491 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 PPP4R3AQ6IN85 833 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 TMEM105Q8N8V8 129 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 PRPF31Q8WWY3 499 aaKnown RBP19.22■□□□□ 0.67
SMG9-210ENST00000600097 KLHL5Q96PQ7 755 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 DHX33Q9H6R0 707 aaKnown RBP19.22■□□□□ 0.67
SMG9-210ENST00000600097 KCNMB3Q9NPA1 279 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 MRPL17Q9NRX2 175 aaKnown RBP19.22■□□□□ 0.67
SMG9-210ENST00000600097 VAV3Q9UKW4 847 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 FAN1Q9Y2M0 1017 aa19.22■□□□□ 0.67
SMG9-210ENST00000600097 MYO10Q9HD67 2058 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 CCDC194A0A1B0GVG4 234 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 ASAP2O43150 1006 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 DDHD2O94830 711 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 CLCN4P51793 760 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 CLCN5P51795 746 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 C15orf39Q6ZRI6 1047 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 OTUD6AQ7L8S5 288 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 NEK8Q86SG6 692 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 CNNM3Q8NE01 707 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 TCP11Q8WWU5 503 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 NAP1L4Q99733 375 aaKnown RBP19.21■□□□□ 0.67
SMG9-210ENST00000600097 SMOC2Q9H3U7 446 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 UBN1Q9NPG3 1134 aa19.21■□□□□ 0.67
SMG9-210ENST00000600097 TBX3O15119 743 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 B4GALT3O60512 393 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 LILRB3O75022 631 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 CNPP09543 421 aaKnown RBP19.2■□□□□ 0.66
SMG9-210ENST00000600097 SRGAP2CP0DJJ0 459 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 HOXA11P31270 313 aaPredicted RBP19.2■□□□□ 0.66
SMG9-210ENST00000600097 LAMTOR4Q0VGL1 99 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 PCBP1Q15365 356 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMG9-210ENST00000600097 C4orf19Q8IY42 314 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 TMEM143Q96AN5 459 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 AIFM3Q96NN9 605 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 TM6SF1Q9BZW5 370 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 DPP7Q9UHL4 492 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 SSX2IPQ9Y2D8 614 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 USP34Q70CQ2 3546 aa19.2■□□□□ 0.66
SMG9-210ENST00000600097 NRP1O14786 923 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 CDKL5O76039 1030 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 SSBP05455 408 aaKnown RBP eCLIP19.19■□□□□ 0.66
SMG9-210ENST00000600097 URODP06132 367 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 XBP1P17861 261 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 NCLP19338 710 aaKnown RBP19.19■□□□□ 0.66
SMG9-210ENST00000600097 YWHABP31946 246 aaKnown RBP19.19■□□□□ 0.66
SMG9-210ENST00000600097 NBL1P41271 181 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 TDGQ13569 410 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 EPHA7Q15375 998 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 UBXN11Q5T124 520 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 ELMSAN1Q6PJG2 1045 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 ZNF579Q8NAF0 562 aaKnown RBP19.19■□□□□ 0.66
SMG9-210ENST00000600097 LXNQ9BS40 222 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 PHF20Q9BVI0 1012 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 MINDY3Q9H8M7 445 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 KCNJ14Q9UNX9 436 aa19.19■□□□□ 0.66
SMG9-210ENST00000600097 MARCH6O60337 910 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 ERLIN2O94905 339 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 POMCP01189 267 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 SOD2P04179 222 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 AXLP30530 894 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 AFF1P51825 1210 aaKnown RBP19.18■□□□□ 0.66
SMG9-210ENST00000600097 STK3Q13188 491 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 EMC2Q15006 297 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 CYP26C1Q6V0L0 522 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 FERMT3Q86UX7 667 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 RNF149Q8NC42 400 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 CMASQ8NFW8 434 aaPredicted RBP19.18■□□□□ 0.66
SMG9-210ENST00000600097 SNX27Q96L92 541 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 ZSWIM4Q9H7M6 989 aa19.18■□□□□ 0.66
SMG9-210ENST00000600097 WRAP73Q9P2S5 460 aaPredicted RBP19.18■□□□□ 0.66
SMG9-210ENST00000600097 CCNT1O60563 726 aaKnown RBP19.17■□□□□ 0.66
SMG9-210ENST00000600097 ADH1AP07327 375 aa19.17■□□□□ 0.66
SMG9-210ENST00000600097 ITGA4P13612 1032 aa19.17■□□□□ 0.66
SMG9-210ENST00000600097 NCBP1Q09161 790 aaKnown RBP19.17■□□□□ 0.66
SMG9-210ENST00000600097 MXD4Q14582 209 aaPredicted RBP19.17■□□□□ 0.66
SMG9-210ENST00000600097 XKR9Q5GH70 373 aa19.17■□□□□ 0.66
SMG9-210ENST00000600097 HAS1Q92839 578 aa19.17■□□□□ 0.66
SMG9-210ENST00000600097 CCDC51Q96ER9 411 aa19.17■□□□□ 0.66
SMG9-210ENST00000600097 RPS6KC1Q96S38 1066 aa19.17■□□□□ 0.66
SMG9-210ENST00000600097 LARP6Q9BRS8 491 aaKnown RBP19.17■□□□□ 0.66
SMG9-210ENST00000600097 HERC2P3Q9BVR0 1158 aa19.17■□□□□ 0.66
SMG9-210ENST00000600097 RHOBTB2Q9BYZ6 727 aa19.17■□□□□ 0.66
SMG9-210ENST00000600097 IGSF9Q9P2J2 1179 aa19.17■□□□□ 0.66
SMG9-210ENST00000600097 PTPRZ1P23471 2315 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms