RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 BECN1Q14457 450 aa31.13■■■□□ 2.57
SSBP4-206ENST00000599699 SKIV2LQ15477 1246 aaKnown RBP31.13■■■□□ 2.57
SSBP4-206ENST00000599699 MAPK6Q16659 721 aa31.13■■■□□ 2.57
SSBP4-206ENST00000599699 GLB1LQ6UWU2 654 aa31.13■■■□□ 2.57
SSBP4-206ENST00000599699 TRIM6Q9C030 488 aaPredicted RBP31.13■■■□□ 2.57
SSBP4-206ENST00000599699 CCSER1Q9C0I3 900 aa31.13■■■□□ 2.57
SSBP4-206ENST00000599699 EYSQ5T1H1 3165 aa31.12■■■□□ 2.57
SSBP4-206ENST00000599699 GUCY2CP25092 1073 aa31.12■■■□□ 2.57
SSBP4-206ENST00000599699 PEX3P56589 373 aa31.12■■■□□ 2.57
SSBP4-206ENST00000599699 DMP1Q13316 513 aaPredicted RBP31.12■■■□□ 2.57
SSBP4-206ENST00000599699 USP49Q70CQ1 688 aa31.12■■■□□ 2.57
SSBP4-206ENST00000599699 SYMPKQ92797 1274 aaKnown RBP31.12■■■□□ 2.57
SSBP4-206ENST00000599699 MRPL38Q96DV4 380 aaKnown RBP31.12■■■□□ 2.57
SSBP4-206ENST00000599699 PRIMPOLQ96LW4 560 aa31.12■■■□□ 2.57
SSBP4-206ENST00000599699 EIF2AQ9BY44 585 aaKnown RBP31.12■■■□□ 2.57
SSBP4-206ENST00000599699 DAXXQ9UER7 740 aaPredicted RBP31.12■■■□□ 2.57
SSBP4-206ENST00000599699 CCDC39Q9UFE4 941 aa31.12■■■□□ 2.57
SSBP4-206ENST00000599699 INPP5FQ9Y2H2 1132 aa31.12■■■□□ 2.57
SSBP4-206ENST00000599699 NLRC5Q86WI3 1866 aa31.12■■■□□ 2.57
SSBP4-206ENST00000599699 PRKCBP05771 671 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 EFNA5P52803 228 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 PRPF4BQ13523 1007 aaKnown RBP31.11■■■□□ 2.57
SSBP4-206ENST00000599699 RALGAPA2Q2PPJ7 1873 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 PRRC2BQ5JSZ5 2229 aaKnown RBP31.11■■■□□ 2.57
SSBP4-206ENST00000599699 PPP4R3CPQ6ZMV5 832 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 DAW1Q8N136 415 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 KLHL23Q8NBE8 558 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 CNNM3Q8NE01 707 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 P2RX5Q93086 422 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 MRPL9Q9BYD2 267 aaKnown RBP31.11■■■□□ 2.57
SSBP4-206ENST00000599699 FZD8Q9H461 694 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 CWH43Q9H720 699 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 ALG13Q9NP73 1137 aaKnown RBP31.11■■■□□ 2.57
SSBP4-206ENST00000599699 KCND2Q9NZV8 630 aa31.11■■■□□ 2.57
SSBP4-206ENST00000599699 MORC2Q9Y6X9 1032 aaPredicted RBP31.11■■■□□ 2.57
SSBP4-206ENST00000599699 FNDC1Q4ZHG4 1894 aaPredicted RBP31.1■■■□□ 2.57
SSBP4-206ENST00000599699 MEIS3P2A8K0S8 358 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 SFI1A8K8P3 1242 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 SPTLC2O15270 562 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 CSPG5O95196 566 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 LAG3P18627 525 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 NPTX2P47972 431 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 FAM187BQ17R55 369 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 NAALADL2Q58DX5 795 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 LRRC55Q6ZSA7 311 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 MRPL10Q7Z7H8 261 aaKnown RBP31.1■■■□□ 2.57
SSBP4-206ENST00000599699 GPBP1Q86WP2 473 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 CDR2LQ86X02 465 aaPredicted RBP31.1■■■□□ 2.57
SSBP4-206ENST00000599699 LINC00301Q8NCQ3 95 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 RAD54LQ92698 747 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 PLAGL2Q9UPG8 496 aa31.1■■■□□ 2.57
SSBP4-206ENST00000599699 CNTNAP2Q9UHC6 1331 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 GRM6O15303 877 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 ITGA4P13612 1032 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 MAPK7Q13164 816 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 MCM6Q14566 821 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 NOMO2Q5JPE7 1267 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 SLC27A1Q6PCB7 646 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 THNSL1Q8IYQ7 743 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 COLGALT1Q8NBJ5 622 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 KMT5AQ9NQR1 393 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 BLOC1S4Q9NUP1 217 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 IPPQ9Y573 584 aa31.09■■■□□ 2.57
SSBP4-206ENST00000599699 NPHP3-ACAD11A0A0J9YXS1 232 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 A0A1B0GUA9 196 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 K7ERI5 159 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 NPTXRO95502 500 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 KRT18P05783 430 aaKnown RBP31.08■■■□□ 2.57
SSBP4-206ENST00000599699 NCLP19338 710 aaKnown RBP31.08■■■□□ 2.57
SSBP4-206ENST00000599699 AGMOQ6ZNB7 445 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 HACE1Q8IYU2 909 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 SMG8Q8ND04 991 aaKnown RBP31.08■■■□□ 2.57
SSBP4-206ENST00000599699 URGCPQ8TCY9 931 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 LRRC15Q8TF66 581 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 RSPH1Q8WYR4 309 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 APOL6Q9BWW8 343 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 CCDC113Q9H0I3 377 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 RSAD1Q9HA92 442 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 C17orf75Q9HAS0 396 aa31.08■■■□□ 2.57
SSBP4-206ENST00000599699 ACKR2O00590 384 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 OFD1O75665 1012 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 YEATS4O95619 227 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 ITGB1P05556 798 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 CACNB1Q02641 598 aaPredicted RBP31.07■■■□□ 2.56
SSBP4-206ENST00000599699 RNASELQ05823 741 aaKnown RBP31.07■■■□□ 2.56
SSBP4-206ENST00000599699 CSPP1Q1MSJ5 1256 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 ARSHQ5FYA8 562 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 RRAGBQ5VZM2 374 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.07■■■□□ 2.56
SSBP4-206ENST00000599699 LARP4BQ92615 738 aaKnown RBP31.07■■■□□ 2.56
SSBP4-206ENST00000599699 LMAN2LQ9H0V9 348 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 PRDM6Q9NQX0 595 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 USP20Q9Y2K6 914 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 HES2Q9Y543 173 aa31.07■■■□□ 2.56
SSBP4-206ENST00000599699 N4BP3O15049 544 aa31.06■■■□□ 2.56
SSBP4-206ENST00000599699 TIGD5Q53EQ6 642 aa31.06■■■□□ 2.56
SSBP4-206ENST00000599699 ZNF558Q96NG5 402 aa31.06■■■□□ 2.56
SSBP4-206ENST00000599699 UBN1Q9NPG3 1134 aa31.06■■■□□ 2.56
SSBP4-206ENST00000599699 RBM19Q9Y4C8 960 aaKnown RBP31.06■■■□□ 2.56
SSBP4-206ENST00000599699 TTLL13PA6NNM8 815 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms