RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 PCDHB12Q9Y5F1 795 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 MUC3AQ02505 3323 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 LRRIQ4A6NIV6 560 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 B4GALT5O43286 388 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 FGF18O76093 207 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 GUCY2CP25092 1073 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 LONP1P36776 959 aaKnown RBP10.73□□□□□ -0.69
VRK3-215ENST00000599138 PLCB3Q01970 1234 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 MAPK7Q13164 816 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 PPP2R5AQ15172 486 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 SKIV2LQ15477 1246 aaKnown RBP10.73□□□□□ -0.69
VRK3-215ENST00000599138 TCEAL5Q5H9L2 206 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 NOMO2Q5JPE7 1267 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 TJAP1Q5JTD0 557 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 FAM173BQ6P4H8 233 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 KCNT2Q6UVM3 1135 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 GLB1LQ6UWU2 654 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 HSCBQ8IWL3 235 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 SYT2Q8N9I0 419 aaPredicted RBP10.73□□□□□ -0.69
VRK3-215ENST00000599138 CNNM3Q8NE01 707 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 LRRC15Q8TF66 581 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 POF1BQ8WVV4 589 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 HLA-CQ95604 372 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 CPB2Q96IY4 423 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 RUSC1Q9BVN2 902 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 EIF2AQ9BY44 585 aaKnown RBP10.73□□□□□ -0.69
VRK3-215ENST00000599138 C2orf40Q9H1Z8 148 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 ZSCAN16Q9H4T2 348 aaPredicted RBP10.73□□□□□ -0.69
VRK3-215ENST00000599138 POLD4Q9HCU8 107 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 TBC1D13Q9NVG8 400 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 PRMT7Q9NVM4 692 aaPredicted RBP10.73□□□□□ -0.69
VRK3-215ENST00000599138 LZTS1Q9Y250 596 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 CLIC4Q9Y696 253 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 TCF20Q9UGU0 1960 aaKnown RBP10.73□□□□□ -0.69
VRK3-215ENST00000599138 CNTNAP2Q9UHC6 1331 aa10.73□□□□□ -0.69
VRK3-215ENST00000599138 TTLL13PA6NNM8 815 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 ACKR2O00590 384 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 FSCN2O14926 492 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 HIP1RO75146 1068 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 EDN1P05305 212 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 IRS1P35568 1242 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 PPM1AP35813 382 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 EFNA5P52803 228 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 SLC12A3P55017 1021 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 TFF2Q03403 129 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 NCBP1Q09161 790 aaKnown RBP10.72□□□□□ -0.69
VRK3-215ENST00000599138 CTC1Q2NKJ3 1217 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 LONRF3Q496Y0 759 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 SPOUT1Q5T280 376 aaKnown RBP10.72□□□□□ -0.69
VRK3-215ENST00000599138 CABP7Q86V35 215 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 ZBTB8OSQ8IWT0 167 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 THNSL1Q8IYQ7 743 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 SLC39A11Q8N1S5 342 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 IFT74Q96LB3 600 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 ZNF558Q96NG5 402 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 TIPINQ9BVW5 301 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
VRK3-215ENST00000599138 CCSER1Q9C0I3 900 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 RNF39Q9H2S5 420 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 UBE2ZQ9H832 354 aaPredicted RBP10.72□□□□□ -0.69
VRK3-215ENST00000599138 RSAD1Q9HA92 442 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 C17orf75Q9HAS0 396 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 UBN1Q9NPG3 1134 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 KCND2Q9NZV8 630 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 FBXO2Q9UK22 296 aaPredicted RBP10.72□□□□□ -0.69
VRK3-215ENST00000599138 IPPQ9Y573 584 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 SRPRBQ9Y5M8 271 aaKnown RBP10.72□□□□□ -0.69
VRK3-215ENST00000599138 MYH15Q9Y2K3 1946 aa10.72□□□□□ -0.69
VRK3-215ENST00000599138 CARNS1A5YM72 827 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 NCK2O43639 380 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 B4GALT3O60512 393 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 PRKCBP05771 671 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 PLA2G4BP0C869 781 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 BMP1P13497 986 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 ITGA4P13612 1032 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 PDIA4P13667 645 aaKnown RBP10.71□□□□□ -0.69
VRK3-215ENST00000599138 PBX3P40426 434 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 UBA7P41226 1012 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 NPTX2P47972 431 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 NASPP49321 788 aaPredicted RBP10.71□□□□□ -0.69
VRK3-215ENST00000599138 AFF1P51825 1210 aaKnown RBP10.71□□□□□ -0.69
VRK3-215ENST00000599138 BCAR1P56945 870 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 HYAL1Q12794 435 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 SLC39A14Q15043 492 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 TRIP11Q15643 1979 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 ZRSR1Q15695 479 aaKnown RBP10.71□□□□□ -0.69
VRK3-215ENST00000599138 MAPK6Q16659 721 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 AAK1Q2M2I8 961 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 SLC27A1Q6PCB7 646 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 DEPTORQ8TB45 409 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 MRPS27Q92552 414 aaKnown RBP10.71□□□□□ -0.69
VRK3-215ENST00000599138 PABPC5Q96DU9 382 aaKnown RBP10.71□□□□□ -0.69
VRK3-215ENST00000599138 DRC1Q96MC2 740 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 USP28Q96RU2 1077 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 PLIN2Q99541 437 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 NTPCRQ9BSD7 190 aaKnown RBP10.71□□□□□ -0.69
VRK3-215ENST00000599138 KIFC3Q9BVG8 833 aa10.71□□□□□ -0.69
VRK3-215ENST00000599138 PDZD7Q9H5P4 517 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms