RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 CCDC51Q96ER9 411 aa16.63■□□□□ 0.25
GTF2F1-206ENST00000598607 KIFC3Q9BVG8 833 aa16.63■□□□□ 0.25
GTF2F1-206ENST00000598607 CCDC113Q9H0I3 377 aa16.63■□□□□ 0.25
GTF2F1-206ENST00000598607 PANK4Q9NVE7 773 aa16.63■□□□□ 0.25
GTF2F1-206ENST00000598607 TRIP11Q15643 1979 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 FRMD3A2A2Y4 597 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 GOLGA6L22H0YM25 854 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 K7ENM7 598 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 ACKR2O00590 384 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 MGEA5O60502 916 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 STAG3L1P0CL83 205 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 SARSP49591 514 aaKnown RBP16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 RAB27AP51159 221 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 DEFB103AP81534 67 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 PRPF4BQ13523 1007 aaKnown RBP16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 AMHR2Q16671 573 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 TMEM132AQ24JP5 1023 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 LRIT3Q3SXY7 679 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 HAUS6Q7Z4H7 955 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 RTN4RL1Q86UN2 441 aaPredicted RBP16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 SFR1Q86XK3 245 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 FMR1NBQ8N0W7 255 aaPredicted RBP16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 LINC01599Q8WXQ3 324 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 KCNN1Q92952 543 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 PAGE5Q96GU1 130 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 TIGD1Q96MW7 591 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 TRAIPQ9BWF2 469 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 OLFML3Q9NRN5 406 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 RALGAPA2Q2PPJ7 1873 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 CNTNAP2Q9UHC6 1331 aa16.62■□□□□ 0.25
GTF2F1-206ENST00000598607 PVALEFA0A1B0GWK0 134 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 C9IYK1 514 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 N4BP3O15049 544 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 GTPBP6O43824 516 aaPredicted RBP16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 PRPF40AO75400 957 aaKnown RBP16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 ARF4P18085 180 aaPredicted RBP16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 LIG1P18858 919 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 HERC4Q5GLZ8 1057 aaPredicted RBP16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 UNC13DQ70J99 1090 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 NPAS4Q8IUM7 802 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 TMEM161BQ8NDZ6 487 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 ENGASEQ8NFI3 743 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 TOP1MTQ969P6 601 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 MRPL4Q9BYD3 311 aaKnown RBP16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 ST6GALNAC4Q9H4F1 302 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 ELAC1Q9H777 363 aaKnown RBP16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 HOOK1Q9UJC3 728 aaKnown RBP16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 LRFN2Q9ULH4 789 aa16.61■□□□□ 0.25
GTF2F1-206ENST00000598607 TRIOBPQ9H2D6 2365 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 A0A0U1RQF3 1178 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 GADD45BO75293 160 aaPredicted RBP16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 HOXA11P31270 313 aaPredicted RBP16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 SMAD3P84022 425 aaKnown RBP16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 COASYQ13057 564 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 SNW1Q13573 536 aaKnown RBP16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 CUL4BQ13620 913 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 ALCAMQ13740 583 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 STXBP4Q6ZWJ1 553 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 APBB1IPQ7Z5R6 666 aaPredicted RBP16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 HERC6Q8IVU3 1022 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 CCDC47Q96A33 483 aaKnown RBP16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 HVCN1Q96D96 273 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 CPB2Q96IY4 423 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 ADPGKQ9BRR6 497 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 ZBED2Q9BTP6 218 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 BLZF1Q9H2G9 400 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 MRPL44Q9H9J2 332 aaKnown RBP16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 FAM105AQ9NUU6 356 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 TMEM161AQ9NX61 479 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 PCDHB7Q9Y5E2 793 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 KIAA1671Q9BY89 1806 aa16.6■□□□□ 0.25
GTF2F1-206ENST00000598607 A0A1B0GUA9 196 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 B4GALT5O43286 388 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 KINO60870 393 aaKnown RBP16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 UPP2O95045 317 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 GJB5O95377 273 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 EOMESO95936 686 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 FAM189BP81408 668 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 GTF2BQ00403 316 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 RAB30Q15771 203 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 SLC27A1Q6PCB7 646 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 ZNF720Q7Z2F6 126 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 GRAMD1CQ8IYS0 662 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 FIZ1Q96SL8 496 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 TRIM6Q9C030 488 aaPredicted RBP16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 MSRAQ9UJ68 235 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 PCDHB13Q9Y5F0 798 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 COL4A6Q14031 1691 aa16.59■□□□□ 0.25
GTF2F1-206ENST00000598607 HOXA2O43364 376 aa16.58■□□□□ 0.24
GTF2F1-206ENST00000598607 TLL1O43897 1013 aa16.58■□□□□ 0.24
GTF2F1-206ENST00000598607 ZNF623O75123 536 aa16.58■□□□□ 0.24
GTF2F1-206ENST00000598607 NR1I2O75469 434 aa16.58■□□□□ 0.24
GTF2F1-206ENST00000598607 GCNT3O95395 438 aa16.58■□□□□ 0.24
GTF2F1-206ENST00000598607 NMT1P30419 496 aaKnown RBP16.58■□□□□ 0.24
GTF2F1-206ENST00000598607 ATF7IP2Q5U623 682 aa16.58■□□□□ 0.24
GTF2F1-206ENST00000598607 TAS1R3Q7RTX0 852 aa16.58■□□□□ 0.24
GTF2F1-206ENST00000598607 ECHDC2Q86YB7 292 aa16.58■□□□□ 0.24
GTF2F1-206ENST00000598607 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
GTF2F1-206ENST00000598607 PGBD4Q96DM1 585 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms