RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 AGMOQ6ZNB7 445 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 MAEAQ7L5Y9 396 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 IFT74Q96LB3 600 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 CERS4Q9HA82 394 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 ODF2LQ9ULJ1 636 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 COL4A4P53420 1690 aaPredicted RBP19.49■□□□□ 0.71
USHBP1-209ENST00000598570 CNTNAP2Q9UHC6 1331 aa19.49■□□□□ 0.71
USHBP1-209ENST00000598570 LRRIQ4A6NIV6 560 aa19.48■□□□□ 0.71
USHBP1-209ENST00000598570 OFD1O75665 1012 aa19.48■□□□□ 0.71
USHBP1-209ENST00000598570 SCP2P22307 547 aa19.48■□□□□ 0.71
USHBP1-209ENST00000598570 CEBPZQ03701 1054 aaKnown RBP19.48■□□□□ 0.71
USHBP1-209ENST00000598570 NCBP1Q09161 790 aaKnown RBP19.48■□□□□ 0.71
USHBP1-209ENST00000598570 BECN1Q14457 450 aa19.48■□□□□ 0.71
USHBP1-209ENST00000598570 TWF2Q6IBS0 349 aaKnown RBP19.48■□□□□ 0.71
USHBP1-209ENST00000598570 FBXO22Q8NEZ5 403 aa19.48■□□□□ 0.71
USHBP1-209ENST00000598570 CDK5RAP3Q96JB5 506 aa19.48■□□□□ 0.71
USHBP1-209ENST00000598570 TYW1Q9NV66 732 aaKnown RBP19.48■□□□□ 0.71
USHBP1-209ENST00000598570 CFAP45Q9UL16 551 aa19.48■□□□□ 0.71
USHBP1-209ENST00000598570 PHLPP2Q6ZVD8 1323 aa19.48■□□□□ 0.71
USHBP1-209ENST00000598570 MYH11P35749 1972 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 TTLL13PA6NNM8 815 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 B4GALT5O43286 388 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 CUTAO60888 179 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 ERLIN2O94905 339 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 EDN1P05305 212 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 PLS3P13797 630 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 GIT2Q14161 759 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 STK38Q15208 465 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 MAPK6Q16659 721 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 SPECC1Q5M775 1068 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 TAS1R3Q7RTX0 852 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 ZBTB8OSQ8IWT0 167 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 SPRYD3Q8NCJ5 442 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 KCNG4Q8TDN1 519 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 PGBD4Q96DM1 585 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 PLIN2Q99541 437 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 LMAN2LQ9H0V9 348 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 POLD4Q9HCU8 107 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 PTPRHQ9HD43 1115 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 UBN1Q9NPG3 1134 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 PLAGL2Q9UPG8 496 aa19.47■□□□□ 0.71
USHBP1-209ENST00000598570 A0A087X0B3 334 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 TBKBP1A7MCY6 615 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 MEIS3P2A8K0S8 358 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 CAMK1Q14012 370 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 MCM6Q14566 821 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 COL19A1Q14993 1142 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 E2F4Q16254 413 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 CSPP1Q1MSJ5 1256 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 NT5DC1Q5TFE4 455 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 SLC27A1Q6PCB7 646 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 TMEM161BQ8NDZ6 487 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 MAFAQ8NHW3 353 aaPredicted RBP19.46■□□□□ 0.71
USHBP1-209ENST00000598570 DEPTORQ8TB45 409 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 LARP4BQ92615 738 aaKnown RBP19.46■□□□□ 0.71
USHBP1-209ENST00000598570 MRPL38Q96DV4 380 aaKnown RBP19.46■□□□□ 0.71
USHBP1-209ENST00000598570 FIZ1Q96SL8 496 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 C11orf84Q9BUA3 381 aaPredicted RBP19.46■□□□□ 0.71
USHBP1-209ENST00000598570 EIF2AQ9BY44 585 aaKnown RBP19.46■□□□□ 0.71
USHBP1-209ENST00000598570 CCDC39Q9UFE4 941 aa19.46■□□□□ 0.71
USHBP1-209ENST00000598570 A0A0C4DFX4 3053 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 PEX3P56589 373 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 PLCB3Q01970 1234 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 DNM1Q05193 864 aaKnown RBP19.45■□□□□ 0.7
USHBP1-209ENST00000598570 GPM6BQ13491 265 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 ZRSR1Q15695 479 aaKnown RBP19.45■□□□□ 0.7
USHBP1-209ENST00000598570 CNNM4Q6P4Q7 775 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 SHC4Q6S5L8 630 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 SPPL3Q8TCT6 385 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 CPB2Q96IY4 423 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 ST6GALNAC4Q9H4F1 302 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 PDZD7Q9H5P4 517 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 PCDHA7Q9UN72 937 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 IPPQ9Y573 584 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 MYO7AQ13402 2215 aa19.45■□□□□ 0.7
USHBP1-209ENST00000598570 CARNS1A5YM72 827 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 K7ERI5 159 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 ABLIM1O14639 778 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 PRKCBP05771 671 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 MAPTP10636 758 aaKnown RBP19.44■□□□□ 0.7
USHBP1-209ENST00000598570 PROZP22891 400 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 NCKAP1LP55160 1127 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 DMP1Q13316 513 aaPredicted RBP19.44■□□□□ 0.7
USHBP1-209ENST00000598570 PRPF4BQ13523 1007 aaKnown RBP19.44■□□□□ 0.7
USHBP1-209ENST00000598570 RRAGBQ5VZM2 374 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 CCDC73Q6ZRK6 1079 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 GPBP1Q86WP2 473 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 LRRC43Q8N309 656 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 GSTCDQ8NEC7 633 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 GDPD5Q8WTR4 605 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 DNAJC19Q96DA6 116 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 REEP2Q9BRK0 252 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 MRPL9Q9BYD2 267 aaKnown RBP19.44■□□□□ 0.7
USHBP1-209ENST00000598570 RNF39Q9H2S5 420 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 LZTS1Q9Y250 596 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 TNFSF13BQ9Y275 285 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 ATG2AQ2TAZ0 1938 aa19.44■□□□□ 0.7
USHBP1-209ENST00000598570 TCHHQ07283 1943 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 NPHP3-ACAD11A0A0J9YXS1 232 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 SFI1A8K8P3 1242 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms