RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 BCAR1P56945 870 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 ZRSR1Q15695 479 aaKnown RBP16.2■□□□□ 0.18
XRCC1-208ENST00000598422 PLPP4Q5VZY2 271 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 ADGRD2Q7Z7M1 963 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 IGSF22Q8N9C0 903 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.2■□□□□ 0.18
XRCC1-208ENST00000598422 DEPTORQ8TB45 409 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 BACH2Q9BYV9 841 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 GBP3Q9H0R5 595 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 C2orf40Q9H1Z8 148 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 DDX19AQ9NUU7 478 aaKnown RBP16.2■□□□□ 0.18
XRCC1-208ENST00000598422 TBC1D13Q9NVG8 400 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 PCDHGC5Q9Y5F6 944 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 VPS37CA5D8V6 355 aaPredicted RBP16.19■□□□□ 0.18
XRCC1-208ENST00000598422 PP2D1A8MPX8 630 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 OFD1O75665 1012 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 ITGA4P13612 1032 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 CA8P35219 290 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 ATP2C1P98194 919 aaPredicted RBP16.19■□□□□ 0.18
XRCC1-208ENST00000598422 PPP2R5AQ15172 486 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 CLUL1Q15846 466 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 CTC1Q2NKJ3 1217 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 UBXN11Q5T124 520 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 AGMOQ6ZNB7 445 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 TMC7Q7Z402 723 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 SLC39A11Q8N1S5 342 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 EFHBQ8N7U6 833 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 IFT74Q96LB3 600 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 FAM193BQ96PV7 902 aaPredicted RBP16.19■□□□□ 0.18
XRCC1-208ENST00000598422 CSRNP2Q9H175 543 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 NGRNQ9NPE2 291 aaKnown RBP16.19■□□□□ 0.18
XRCC1-208ENST00000598422 UBN1Q9NPG3 1134 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 PRMT7Q9NVM4 692 aaPredicted RBP16.19■□□□□ 0.18
XRCC1-208ENST00000598422 DNM3Q9UQ16 869 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 IPPQ9Y573 584 aa16.19■□□□□ 0.18
XRCC1-208ENST00000598422 SPTBN5Q9NRC6 3674 aaKnown RBP16.18■□□□□ 0.18
XRCC1-208ENST00000598422 GRXCR2A6NFK2 248 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 LINC01565O15544 149 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 B4GALT5O43286 388 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 TBX10O75333 385 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 SRGAP2BP0DMP2 458 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 IL9P15248 144 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 ARF4P18085 180 aaPredicted RBP16.18■□□□□ 0.18
XRCC1-208ENST00000598422 LIG1P18858 919 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 NCLP19338 710 aaKnown RBP16.18■□□□□ 0.18
XRCC1-208ENST00000598422 PDCP20941 246 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 NAMPTP43490 491 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 ERVFC1P60507 584 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 ECM1Q16610 540 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 CDCA2Q69YH5 1023 aaPredicted RBP16.18■□□□□ 0.18
XRCC1-208ENST00000598422 BRAPQ7Z569 592 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 MRPL10Q7Z7H8 261 aaKnown RBP16.18■□□□□ 0.18
XRCC1-208ENST00000598422 KIFAP3Q92845 792 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 CDK5RAP3Q96JB5 506 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 PRIMPOLQ96LW4 560 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 CDCA3Q99618 268 aaPredicted RBP16.18■□□□□ 0.18
XRCC1-208ENST00000598422 APOL6Q9BWW8 343 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 EIF2AQ9BY44 585 aaKnown RBP16.18■□□□□ 0.18
XRCC1-208ENST00000598422 KANSL3Q9P2N6 904 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 NLRC5Q86WI3 1866 aa16.18■□□□□ 0.18
XRCC1-208ENST00000598422 LOXHD1Q8IVV2 1947 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 VWA3AA6NCI4 1184 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 NT5C1B-RDH14C9J2C7 533 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 FSCN2O14926 492 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 PER2O15055 1255 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 BMP15O95972 392 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 SSTR3P32745 418 aaPredicted RBP16.17■□□□□ 0.18
XRCC1-208ENST00000598422 LTBRP36941 435 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 SMAD4Q13485 552 aaKnown RBP16.17■□□□□ 0.18
XRCC1-208ENST00000598422 CUL4AQ13619 759 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 SMC1AQ14683 1233 aaKnown RBP16.17■□□□□ 0.18
XRCC1-208ENST00000598422 MAPK6Q16659 721 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 AMHR2Q16671 573 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 SLC27A1Q6PCB7 646 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 TMEM87AQ8NBN3 555 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 NRDE2Q9H7Z3 1164 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 CD207Q9UJ71 328 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 XIRP2A4UGR9 3374 aa16.17■□□□□ 0.18
XRCC1-208ENST00000598422 WDR81Q562E7 1941 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 NPTXRO95502 500 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 EYA4O95677 639 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 POMCP01189 267 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 PRKCBP05771 671 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 CDC25AP30304 524 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 MLH1P40692 756 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 DLX2Q07687 328 aaPredicted RBP16.16■□□□□ 0.18
XRCC1-208ENST00000598422 ADAM15Q13444 863 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 PRPF4BQ13523 1007 aaKnown RBP16.16■□□□□ 0.18
XRCC1-208ENST00000598422 IL17AQ16552 155 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 ARL6IP4Q66PJ3 421 aaKnown RBP16.16■□□□□ 0.18
XRCC1-208ENST00000598422 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 CDR2LQ86X02 465 aaPredicted RBP16.16■□□□□ 0.18
XRCC1-208ENST00000598422 SMG8Q8ND04 991 aaKnown RBP16.16■□□□□ 0.18
XRCC1-208ENST00000598422 BSNDQ8WZ55 320 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 GAD1Q99259 594 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 NXF3Q9H4D5 531 aaKnown RBP16.16■□□□□ 0.18
XRCC1-208ENST00000598422 HES2Q9Y543 173 aa16.16■□□□□ 0.18
XRCC1-208ENST00000598422 E9PMD0 336 aa16.15■□□□□ 0.18
XRCC1-208ENST00000598422 N4BP3O15049 544 aa16.15■□□□□ 0.18
XRCC1-208ENST00000598422 SSBP05455 408 aaKnown RBP eCLIP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms