RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 GLB1LQ6UWU2 654 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 CDR2LQ86X02 465 aaPredicted RBP15.29■□□□□ 0.04
SCAF1-203ENST00000598359 SLC39A11Q8N1S5 342 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 BCL7CQ8WUZ0 217 aaPredicted RBP15.29■□□□□ 0.04
SCAF1-203ENST00000598359 PPP2R3CQ969Q6 453 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 TCF25Q9BQ70 676 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 EIF2AQ9BY44 585 aaKnown RBP15.29■□□□□ 0.04
SCAF1-203ENST00000598359 POLD4Q9HCU8 107 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 TUFT1Q9NNX1 390 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 TBC1D13Q9NVG8 400 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 DNAJB4Q9UDY4 337 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 NOL7Q9UMY1 257 aaKnown RBP15.29■□□□□ 0.04
SCAF1-203ENST00000598359 PCDHB6Q9Y5E3 794 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 B4GALT5O43286 388 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 MBTPS2O43462 519 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 ZNF623O75123 536 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 ERLIN2O94905 339 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 SKIP12755 728 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 RAB27AP51159 221 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 MBTD1Q05BQ5 628 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 MXD4Q14582 209 aaPredicted RBP15.28■□□□□ 0.04
SCAF1-203ENST00000598359 MCTP1Q6DN14 999 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 LLGL2Q6P1M3 1020 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 TMC7Q7Z402 723 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 ZNF280BQ86YH2 543 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 GJD3Q8N144 294 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 MSLNLQ96KJ4 702 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 POLR3CQ9BUI4 534 aaPredicted RBP15.28■□□□□ 0.04
SCAF1-203ENST00000598359 MRPL9Q9BYD2 267 aaKnown RBP15.28■□□□□ 0.04
SCAF1-203ENST00000598359 RNF39Q9H2S5 420 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 NRDE2Q9H7Z3 1164 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 PUF60Q9UHX1 559 aaKnown RBP15.28■□□□□ 0.04
SCAF1-203ENST00000598359 CD207Q9UJ71 328 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 LZTS1Q9Y250 596 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 HES2Q9Y543 173 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 C5orf42Q9H799 3197 aa15.28■□□□□ 0.04
SCAF1-203ENST00000598359 PP2D1A8MPX8 630 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 RPA1P27694 616 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 GJB2P29033 226 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 CA8P35219 290 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 PPM1AP35813 382 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 CCT6AP40227 531 aaKnown RBP15.27■□□□□ 0.04
SCAF1-203ENST00000598359 TRAPPC10P48553 1259 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 ALDH7A1P49419 539 aaKnown RBP15.27■□□□□ 0.04
SCAF1-203ENST00000598359 KRT17Q04695 432 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 RNASELQ05823 741 aaKnown RBP15.27■□□□□ 0.04
SCAF1-203ENST00000598359 ZP2Q05996 745 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 PTGDRQ13258 359 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 ORC2Q13416 577 aaPredicted RBP15.27■□□□□ 0.04
SCAF1-203ENST00000598359 TFDP1Q14186 410 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 AMHR2Q16671 573 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 DUSP6Q16828 381 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 MRPL10Q7Z7H8 261 aaKnown RBP15.27■□□□□ 0.04
SCAF1-203ENST00000598359 SMG8Q8ND04 991 aaKnown RBP15.27■□□□□ 0.04
SCAF1-203ENST00000598359 ERMNQ8TAM6 284 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 AUTS2Q8WXX7 1259 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 PGBD4Q96DM1 585 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 NACC1Q96RE7 527 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 APOL6Q9BWW8 343 aa15.27■□□□□ 0.04
SCAF1-203ENST00000598359 DBR1Q9UK59 544 aaKnown RBP15.27■□□□□ 0.04
SCAF1-203ENST00000598359 ARHGEF35A5YM69 484 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 LRRIQ4A6NIV6 560 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 DDHD2O94830 711 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 POMCP01189 267 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 XRCC6P12956 609 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCAF1-203ENST00000598359 SLC11A1P49279 550 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 SMAD4Q13485 552 aaKnown RBP15.26■□□□□ 0.03
SCAF1-203ENST00000598359 SMAD2Q15796 467 aaKnown RBP15.26■□□□□ 0.03
SCAF1-203ENST00000598359 IL17AQ16552 155 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 IFNLR1Q8IU57 520 aaPredicted RBP15.26■□□□□ 0.03
SCAF1-203ENST00000598359 BSNDQ8WZ55 320 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 APOL5Q9BWW9 433 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 RSAD1Q9HA92 442 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 LRWD1Q9UFC0 647 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 USP20Q9Y2K6 914 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 IPPQ9Y573 584 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 ZNF318Q5VUA4 2279 aa15.26■□□□□ 0.03
SCAF1-203ENST00000598359 TTLL13PA6NNM8 815 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 GALTP07902 379 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 ITGA4P13612 1032 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 ARF4P18085 180 aaPredicted RBP15.25■□□□□ 0.03
SCAF1-203ENST00000598359 NCLP19338 710 aaKnown RBP15.25■□□□□ 0.03
SCAF1-203ENST00000598359 CDC25AP30304 524 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 FXR2P51116 673 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCAF1-203ENST00000598359 NHLH1Q02575 133 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 PDE12Q6L8Q7 609 aaKnown RBP15.25■□□□□ 0.03
SCAF1-203ENST00000598359 NOTUMQ6P988 496 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 PADI6Q6TGC4 694 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 URGCPQ8TCY9 931 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 TMEM169Q96HH4 297 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 VN1R3Q9BXE9 311 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 CSRNP2Q9H175 543 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 NXF3Q9H4D5 531 aaKnown RBP15.25■□□□□ 0.03
SCAF1-203ENST00000598359 NGRNQ9NPE2 291 aaKnown RBP15.25■□□□□ 0.03
SCAF1-203ENST00000598359 KIAA1024Q9UPX6 916 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 FAM50BQ9Y247 325 aa15.25■□□□□ 0.03
SCAF1-203ENST00000598359 C2orf71A6NGG8 1288 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 NPTXRO95502 500 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 EYA4O95677 639 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 LIG1P18858 919 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms