RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 SPEM2Q0P670 501 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 MLF2Q15773 248 aaPredicted RBP17.47■□□□□ 0.39
LIG1-214ENST00000597146 LPAL2Q16609 132 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 PARM1Q6UWI2 310 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 NIPA1Q7RTP0 329 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 RSPH1Q8WYR4 309 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 NELL1Q92832 810 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 HERC2P3Q9BVR0 1158 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 RIC8AQ9NPQ8 531 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 CHST12Q9NRB3 414 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 MARCH5Q9NX47 278 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.47■□□□□ 0.39
LIG1-214ENST00000597146 GMEB2Q9UKD1 530 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 SPEGQ15772 3267 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 IGLV3-22A0A075B6J6 115 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 FAM170BA6NMN3 283 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 ZNF862O60290 1169 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 NAPAP54920 295 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 NFXL1Q6ZNB6 911 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 TMTC3Q6ZXV5 915 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 BORCS6Q96GS4 357 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 FAM167AQ96KS9 214 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 ZNF577Q9BSK1 485 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 TRAIPQ9BWF2 469 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 NT5C3AQ9H0P0 336 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 LTB4R2Q9NPC1 389 aa17.46■□□□□ 0.39
LIG1-214ENST00000597146 PRG3Q9Y2Y8 225 aaPredicted RBP17.46■□□□□ 0.39
LIG1-214ENST00000597146 NRP1O14786 923 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 SLC30A4O14863 429 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 OATP04181 439 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 PSAPP07602 524 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 HOXB3P14651 431 aaPredicted RBP17.45■□□□□ 0.38
LIG1-214ENST00000597146 GLUD2P49448 558 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 ADCY7P51828 1080 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 PRKCEQ02156 737 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 UGCGQ16739 394 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 ZNF746Q6NUN9 644 aaPredicted RBP17.45■□□□□ 0.38
LIG1-214ENST00000597146 ELMSAN1Q6PJG2 1045 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 AGMOQ6ZNB7 445 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 PALB2Q86YC2 1186 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 ZNF710Q8N1W2 664 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 URGCPQ8TCY9 931 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 PHKBQ93100 1093 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 GCOM2Q9BZD3 368 aaPredicted RBP17.45■□□□□ 0.38
LIG1-214ENST00000597146 STK39Q9UEW8 545 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 DPP7Q9UHL4 492 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 TCEAL9Q9UHQ7 104 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 FAN1Q9Y2M0 1017 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 PCDHA10Q9Y5I2 948 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 CNTNAP5Q8WYK1 1306 aa17.45■□□□□ 0.38
LIG1-214ENST00000597146 PKD1L2Q7Z442 2459 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 A0A087WZ62 844 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.44■□□□□ 0.38
LIG1-214ENST00000597146 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 F8W810 466 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 SH2B2O14492 632 aaPredicted RBP17.44■□□□□ 0.38
LIG1-214ENST00000597146 SGSM2O43147 1006 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 PRC1O43663 620 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 FOSP01100 380 aaPredicted RBP17.44■□□□□ 0.38
LIG1-214ENST00000597146 POMCP01189 267 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 SKIP12755 728 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 SFPQP23246 707 aaKnown RBP eCLIP17.44■□□□□ 0.38
LIG1-214ENST00000597146 TARSP26639 723 aaKnown RBP17.44■□□□□ 0.38
LIG1-214ENST00000597146 SLC44A4Q53GD3 710 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 GLYCTKQ8IVS8 523 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 SMAP1Q8IYB5 467 aaPredicted RBP17.44■□□□□ 0.38
LIG1-214ENST00000597146 NETO1Q8TDF5 533 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 B3GALT6Q96L58 329 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 FAM193BQ96PV7 902 aaPredicted RBP17.44■□□□□ 0.38
LIG1-214ENST00000597146 FDXACB1Q9BRP7 624 aaPredicted RBP17.44■□□□□ 0.38
LIG1-214ENST00000597146 TMEM175Q9BSA9 504 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 PRMT8Q9NR22 394 aaPredicted RBP17.44■□□□□ 0.38
LIG1-214ENST00000597146 SAMM50Q9Y512 469 aa17.44■□□□□ 0.38
LIG1-214ENST00000597146 TGM5O43548 720 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 TBC1D4O60343 1298 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 PAPLNO95428 1278 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 FSHRP23945 695 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 RAB27AP51159 221 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 NTHL1P78549 312 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 PRKCQQ04759 706 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 AP3B2Q13367 1082 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 RNF168Q8IYW5 571 aaPredicted RBP17.43■□□□□ 0.38
LIG1-214ENST00000597146 PRKD2Q9BZL6 878 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 RXFP1Q9HBX9 757 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 NOTCH4Q99466 2003 aa17.43■□□□□ 0.38
LIG1-214ENST00000597146 IGF2RP11717 2491 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 ZNF623O75123 536 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 ALDH2P05091 517 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 CLK2P49760 499 aaKnown RBP17.42■□□□□ 0.38
LIG1-214ENST00000597146 DMWDQ09019 674 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 JAKMIP3Q5VZ66 844 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 PPP1R18Q6NYC8 613 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 OSBPL6Q9BZF3 934 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 RSAD1Q9HA92 442 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 TBC1D22BQ9NU19 505 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 ZDHHC7Q9NXF8 308 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 SSX2IPQ9Y2D8 614 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 PCDHB2Q9Y5E7 798 aa17.42■□□□□ 0.38
LIG1-214ENST00000597146 TMEM150BA6NC51 233 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms