RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 TMEM134Q9H6X4 195 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 CERS4Q9HA82 394 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 ARHGAP28Q9P2N2 729 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 PCDHA7Q9UN72 937 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 PCDHB2Q9Y5E7 798 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 CNTNAP2Q9UHC6 1331 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 CCDC169A6NNP5 214 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 C5orf67F2Z3F1 127 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 RB1P06400 928 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 FGFR1P11362 822 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 BMPR1AP36894 532 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 ZNF131P52739 623 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 EPC2Q52LR7 807 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 SHC4Q6S5L8 630 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 SPRED2Q7Z698 418 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 TMEM192Q8IY95 271 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 CASD1Q96PB1 797 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 GAS2L1Q99501 681 aaPredicted RBP20.13■□□□□ 0.81
ZNF558-204ENST00000596172 C17orf80Q9BSJ5 609 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 KMT5AQ9NQR1 393 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 LARSQ9P2J5 1176 aaKnown RBP20.13■□□□□ 0.81
ZNF558-204ENST00000596172 TRANK1O15050 2925 aa20.13■□□□□ 0.81
ZNF558-204ENST00000596172 MYH15Q9Y2K3 1946 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 A0A087X0B3 334 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 NPHP3-ACAD11A0A0J9YXS1 232 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 EPOPA6NHQ4 379 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 TBKBP1A7MCY6 615 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 SFI1A8K8P3 1242 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 K7ERI5 159 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 B4GALT5O43286 388 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 PRKCBP05771 671 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 NCLP19338 710 aaKnown RBP20.12■□□□□ 0.81
ZNF558-204ENST00000596172 IBSPP21815 317 aaPredicted RBP20.12■□□□□ 0.81
ZNF558-204ENST00000596172 SCP2P22307 547 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 GATMP50440 423 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 SMTNP53814 917 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 RAD51AP2Q09MP3 1159 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 PRPF4BQ13523 1007 aaKnown RBP20.12■□□□□ 0.81
ZNF558-204ENST00000596172 GIT2Q14161 759 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 DHX8Q14562 1220 aaKnown RBP20.12■□□□□ 0.81
ZNF558-204ENST00000596172 CLLU1OSQ5K130 101 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 SLC27A1Q6PCB7 646 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 SV2BQ7L1I2 683 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 ABI1Q8IZP0 508 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 LEO1Q8WVC0 666 aaPredicted RBP20.12■□□□□ 0.81
ZNF558-204ENST00000596172 CPB2Q96IY4 423 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 REEP2Q9BRK0 252 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 KIFC3Q9BVG8 833 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 PLVAPQ9BX97 442 aa20.12■□□□□ 0.81
ZNF558-204ENST00000596172 SCAND2PQ9GZW5 306 aaPredicted RBP20.12■□□□□ 0.81
ZNF558-204ENST00000596172 MRPL42Q9Y6G3 142 aaKnown RBP20.12■□□□□ 0.81
ZNF558-204ENST00000596172 FOSL2P15408 326 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 STAT6P42226 847 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 ADGRE1Q14246 886 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 PAN2Q504Q3 1202 aaKnown RBP20.11■□□□□ 0.81
ZNF558-204ENST00000596172 RESP18Q5W5W9 173 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 RNF169Q8NCN4 708 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 SMG8Q8ND04 991 aaKnown RBP20.11■□□□□ 0.81
ZNF558-204ENST00000596172 FBXO22Q8NEZ5 403 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 SPATA32Q96LK8 384 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 PANK2Q9BZ23 570 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 CUEDC2Q9H467 287 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 UBN1Q9NPG3 1134 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 LMCD1Q9NZU5 365 aa20.11■□□□□ 0.81
ZNF558-204ENST00000596172 H0YCG3 227 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 H3BNC9 293 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 N4BP3O15049 544 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 LPXNO60711 386 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 KRT18P05783 430 aaKnown RBP20.1■□□□□ 0.81
ZNF558-204ENST00000596172 E2F4Q16254 413 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 ADALQ6DHV7 355 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 GLB1LQ6UWU2 654 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 IQUBQ8NA54 791 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 TMEM161BQ8NDZ6 487 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 EIF2AQ9BY44 585 aaKnown RBP20.1■□□□□ 0.81
ZNF558-204ENST00000596172 PARVGQ9HBI0 331 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 TYW1Q9NV66 732 aaKnown RBP20.1■□□□□ 0.81
ZNF558-204ENST00000596172 FAM13BQ9NYF5 915 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 MTUS1Q9ULD2 1270 aa20.1■□□□□ 0.81
ZNF558-204ENST00000596172 TTLL13PA6NNM8 815 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 RFXAPO00287 272 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 OFD1O75665 1012 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 FAM13AO94988 1023 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 NCKAP1LP55160 1127 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 NT5DC1Q5TFE4 455 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 AGMOQ6ZNB7 445 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 LRRC55Q6ZSA7 311 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 TAS1R3Q7RTX0 852 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 HACE1Q8IYU2 909 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 LRRC43Q8N309 656 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 PDILTQ8N807 584 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 HELQQ8TDG4 1101 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 DDX12PQ92771 950 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 LPPQ93052 612 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 P2RX5Q93086 422 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 PYM1Q9BRP8 204 aaKnown RBP20.09■□□□□ 0.81
ZNF558-204ENST00000596172 C11orf84Q9BUA3 381 aaPredicted RBP20.09■□□□□ 0.81
ZNF558-204ENST00000596172 MRPL9Q9BYD2 267 aaKnown RBP20.09■□□□□ 0.81
ZNF558-204ENST00000596172 PDZD7Q9H5P4 517 aa20.09■□□□□ 0.81
ZNF558-204ENST00000596172 CWH43Q9H720 699 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms