RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 TBC1D13Q9NVG8 400 aa28.21■■■□□ 2.11
ZNF558-203ENST00000595786 NCLP19338 710 aaKnown RBP28.2■■■□□ 2.1
ZNF558-203ENST00000595786 GLRA2P23416 452 aa28.2■■■□□ 2.1
ZNF558-203ENST00000595786 CAPSQ13938 189 aa28.2■■■□□ 2.1
ZNF558-203ENST00000595786 HAUS3Q68CZ6 603 aa28.2■■■□□ 2.1
ZNF558-203ENST00000595786 AGMOQ6ZNB7 445 aa28.2■■■□□ 2.1
ZNF558-203ENST00000595786 TMC7Q7Z402 723 aa28.2■■■□□ 2.1
ZNF558-203ENST00000595786 URGCPQ8TCY9 931 aa28.2■■■□□ 2.1
ZNF558-203ENST00000595786 TMEM169Q96HH4 297 aa28.2■■■□□ 2.1
ZNF558-203ENST00000595786 ENTPD7Q9NQZ7 604 aa28.2■■■□□ 2.1
ZNF558-203ENST00000595786 C19orf67A6NJJ6 358 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 PI4K2BG5E9Z4 385 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 INO80B-WBP1J3KQ70 363 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 TSPAN1O60635 241 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 GLP2RO95838 553 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 SRGAP2BP0DMP2 458 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 SSTR3P32745 418 aaPredicted RBP28.19■■■□□ 2.1
ZNF558-203ENST00000595786 PBX3P40426 434 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 RNASELQ05823 741 aaKnown RBP28.19■■■□□ 2.1
ZNF558-203ENST00000595786 ZP2Q05996 745 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 SMRP1Q8NCR6 262 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 POP1Q99575 1024 aaKnown RBP28.19■■■□□ 2.1
ZNF558-203ENST00000595786 POLR3FQ9H1D9 316 aaPredicted RBP28.19■■■□□ 2.1
ZNF558-203ENST00000595786 NRDE2Q9H7Z3 1164 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 RSAD1Q9HA92 442 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 STK39Q9UEW8 545 aa28.19■■■□□ 2.1
ZNF558-203ENST00000595786 MEIS3P2A8K0S8 358 aa28.18■■■□□ 2.1
ZNF558-203ENST00000595786 LAD1O00515 517 aa28.18■■■□□ 2.1
ZNF558-203ENST00000595786 PER2O15055 1255 aa28.18■■■□□ 2.1
ZNF558-203ENST00000595786 USO1O60763 962 aaKnown RBP28.18■■■□□ 2.1
ZNF558-203ENST00000595786 MBTD1Q05BQ5 628 aa28.18■■■□□ 2.1
ZNF558-203ENST00000595786 SMC1AQ14683 1233 aaKnown RBP28.18■■■□□ 2.1
ZNF558-203ENST00000595786 CLUL1Q15846 466 aa28.18■■■□□ 2.1
ZNF558-203ENST00000595786 PLPP4Q5VZY2 271 aa28.18■■■□□ 2.1
ZNF558-203ENST00000595786 MRPL43Q8N983 215 aaKnown RBP28.18■■■□□ 2.1
ZNF558-203ENST00000595786 TMX3Q96JJ7 454 aa28.18■■■□□ 2.1
ZNF558-203ENST00000595786 RAB34Q9BZG1 259 aa28.18■■■□□ 2.1
ZNF558-203ENST00000595786 CSRNP2Q9H175 543 aa28.18■■■□□ 2.1
ZNF558-203ENST00000595786 DAXXQ9UER7 740 aaPredicted RBP28.18■■■□□ 2.1
ZNF558-203ENST00000595786 INPP5FQ9Y2H2 1132 aa28.18■■■□□ 2.1
ZNF558-203ENST00000595786 ZC3H11AO75152 810 aaKnown RBP eCLIP28.17■■■□□ 2.1
ZNF558-203ENST00000595786 GALTP07902 379 aa28.17■■■□□ 2.1
ZNF558-203ENST00000595786 TOB1P50616 345 aaPredicted RBP28.17■■■□□ 2.1
ZNF558-203ENST00000595786 KCNC3Q14003 757 aa28.17■■■□□ 2.1
ZNF558-203ENST00000595786 AMHR2Q16671 573 aa28.17■■■□□ 2.1
ZNF558-203ENST00000595786 LONRF3Q496Y0 759 aa28.17■■■□□ 2.1
ZNF558-203ENST00000595786 EPHX3Q9H6B9 360 aa28.17■■■□□ 2.1
ZNF558-203ENST00000595786 A0A087WWV3 80 aa28.16■■■□□ 2.1
ZNF558-203ENST00000595786 INPPL1O15357 1258 aa28.16■■■□□ 2.1
ZNF558-203ENST00000595786 ITGA4P13612 1032 aa28.16■■■□□ 2.1
ZNF558-203ENST00000595786 PTGDRQ13258 359 aa28.16■■■□□ 2.1
ZNF558-203ENST00000595786 POTEGQ6S5H5 508 aa28.16■■■□□ 2.1
ZNF558-203ENST00000595786 DDX53Q86TM3 631 aaKnown RBP28.16■■■□□ 2.1
ZNF558-203ENST00000595786 SMG8Q8ND04 991 aaKnown RBP28.16■■■□□ 2.1
ZNF558-203ENST00000595786 IGSF21Q96ID5 467 aa28.16■■■□□ 2.1
ZNF558-203ENST00000595786 TMEM175Q9BSA9 504 aa28.16■■■□□ 2.1
ZNF558-203ENST00000595786 LRWD1Q9UFC0 647 aa28.16■■■□□ 2.1
ZNF558-203ENST00000595786 ARHGEF35A5YM69 484 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 NT5C1B-RDH14C9J2C7 533 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 ALADP13716 330 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 CYP11B2P19099 503 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 GIT2Q14161 759 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 PADI6Q6TGC4 694 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 HACE1Q8IYU2 909 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 IGSF22Q8N9C0 903 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 PRIMPOLQ96LW4 560 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 BARX2Q9UMQ3 279 aaPredicted RBP28.15■■■□□ 2.1
ZNF558-203ENST00000595786 IPPQ9Y573 584 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 IRAK3Q9Y616 596 aa28.15■■■□□ 2.1
ZNF558-203ENST00000595786 C2orf71A6NGG8 1288 aa28.14■■■□□ 2.1
ZNF558-203ENST00000595786 HIDE1A8MVS5 230 aa28.14■■■□□ 2.1
ZNF558-203ENST00000595786 ARF4P18085 180 aaPredicted RBP28.14■■■□□ 2.1
ZNF558-203ENST00000595786 CCT6AP40227 531 aaKnown RBP28.14■■■□□ 2.1
ZNF558-203ENST00000595786 PRPHP41219 470 aa28.14■■■□□ 2.1
ZNF558-203ENST00000595786 RILPL1Q5EBL4 403 aa28.14■■■□□ 2.1
ZNF558-203ENST00000595786 PPP4R3CPQ6ZMV5 832 aa28.14■■■□□ 2.1
ZNF558-203ENST00000595786 KHSRPQ92945 711 aaKnown RBP eCLIP28.14■■■□□ 2.1
ZNF558-203ENST00000595786 TBC1D32Q96NH3 1257 aa28.14■■■□□ 2.1
ZNF558-203ENST00000595786 FAM193BQ96PV7 902 aaPredicted RBP28.14■■■□□ 2.1
ZNF558-203ENST00000595786 PRMT7Q9NVM4 692 aaPredicted RBP28.14■■■□□ 2.1
ZNF558-203ENST00000595786 PCDHB6Q9Y5E3 794 aa28.14■■■□□ 2.1
ZNF558-203ENST00000595786 A0A1B0GUA9 196 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 ALDH2P05091 517 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 HOXB8P17481 243 aaPredicted RBP28.13■■■□□ 2.09
ZNF558-203ENST00000595786 NBR1Q14596 966 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 FAM187BQ17R55 369 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 CDCA2Q69YH5 1023 aaPredicted RBP28.13■■■□□ 2.09
ZNF558-203ENST00000595786 ZNF280BQ86YH2 543 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 ZBTB8OSQ8IWT0 167 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 VPS52Q8N1B4 723 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 VN1R2Q8NFZ6 395 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 CPB2Q96IY4 423 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 EIF2AQ9BY44 585 aaKnown RBP28.13■■■□□ 2.09
ZNF558-203ENST00000595786 C2orf40Q9H1Z8 148 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 GPRC5CQ9NQ84 441 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 GIT1Q9Y2X7 761 aa28.13■■■□□ 2.09
ZNF558-203ENST00000595786 LRRIQ4A6NIV6 560 aa28.12■■■□□ 2.09
ZNF558-203ENST00000595786 GPR37L1O60883 481 aa28.12■■■□□ 2.09
ZNF558-203ENST00000595786 CXCL14O95715 111 aa28.12■■■□□ 2.09
ZNF558-203ENST00000595786 CTSAP10619 480 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms