RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 FAM186AA6NE01 2351 aa20.85■□□□□ 0.93
PDE4C-208ENST00000595343 LILRB3O75022 631 aa20.85■□□□□ 0.93
PDE4C-208ENST00000595343 DEXIO95424 95 aa20.85■□□□□ 0.93
PDE4C-208ENST00000595343 ALDH2P05091 517 aa20.85■□□□□ 0.93
PDE4C-208ENST00000595343 QARSP47897 775 aaKnown RBP20.85■□□□□ 0.93
PDE4C-208ENST00000595343 TOB2Q14106 344 aaPredicted RBP20.85■□□□□ 0.93
PDE4C-208ENST00000595343 NONOQ15233 471 aaKnown RBP eCLIP20.85■□□□□ 0.93
PDE4C-208ENST00000595343 OTOP3Q7RTS5 596 aa20.85■□□□□ 0.93
PDE4C-208ENST00000595343 ZNF579Q8NAF0 562 aaKnown RBP20.85■□□□□ 0.93
PDE4C-208ENST00000595343 SLC7A3Q8WY07 619 aa20.85■□□□□ 0.93
PDE4C-208ENST00000595343 TMEM175Q9BSA9 504 aa20.85■□□□□ 0.93
PDE4C-208ENST00000595343 MINDY3Q9H8M7 445 aa20.85■□□□□ 0.93
PDE4C-208ENST00000595343 RSAD1Q9HA92 442 aa20.85■□□□□ 0.93
PDE4C-208ENST00000595343 FAN1Q9Y2M0 1017 aa20.85■□□□□ 0.93
PDE4C-208ENST00000595343 CNTNAP2Q9UHC6 1331 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 PRR23AA6NEV1 266 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 SLC37A4O43826 429 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 HOXA11P31270 313 aaPredicted RBP20.84■□□□□ 0.93
PDE4C-208ENST00000595343 PPP2R5CQ13362 524 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 INF2Q27J81 1249 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 UBXN11Q5T124 520 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 GALNT17Q6IS24 598 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 SRGAP1Q7Z6B7 1085 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 FLCNQ8NFG4 579 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 FAM193BQ96PV7 902 aaPredicted RBP20.84■□□□□ 0.93
PDE4C-208ENST00000595343 MRPL17Q9NRX2 175 aaKnown RBP20.84■□□□□ 0.93
PDE4C-208ENST00000595343 KANSL3Q9P2N6 904 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 VAV3Q9UKW4 847 aa20.84■□□□□ 0.93
PDE4C-208ENST00000595343 NRP1O14786 923 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 CPLX1O14810 134 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 POMCP01189 267 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 SRGAP2CP0DJJ0 459 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 TDGQ13569 410 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 CWF19L1Q69YN2 538 aaKnown RBP20.83■□□□□ 0.93
PDE4C-208ENST00000595343 C15orf39Q6ZRI6 1047 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 RUFY3Q7L099 469 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 FAM177A1Q8N128 213 aaPredicted RBP20.83■□□□□ 0.93
PDE4C-208ENST00000595343 PRPF31Q8WWY3 499 aaKnown RBP20.83■□□□□ 0.93
PDE4C-208ENST00000595343 PSPC1Q8WXF1 523 aaKnown RBP20.83■□□□□ 0.93
PDE4C-208ENST00000595343 TMEM143Q96AN5 459 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 CEP170P1Q96L14 293 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 AIFM3Q96NN9 605 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 DHX33Q9H6R0 707 aaKnown RBP20.83■□□□□ 0.93
PDE4C-208ENST00000595343 KCNK12Q9HB15 430 aa20.83■□□□□ 0.93
PDE4C-208ENST00000595343 WRAP73Q9P2S5 460 aaPredicted RBP20.83■□□□□ 0.93
PDE4C-208ENST00000595343 DKC1O60832 514 aaKnown RBP eCLIP20.82■□□□□ 0.92
PDE4C-208ENST00000595343 NEFLP07196 543 aa20.82■□□□□ 0.92
PDE4C-208ENST00000595343 P4HBP07237 508 aaKnown RBP20.82■□□□□ 0.92
PDE4C-208ENST00000595343 NPR3P17342 541 aa20.82■□□□□ 0.92
PDE4C-208ENST00000595343 LAMTOR4Q0VGL1 99 aa20.82■□□□□ 0.92
PDE4C-208ENST00000595343 LETM2Q2VYF4 491 aa20.82■□□□□ 0.92
PDE4C-208ENST00000595343 KRT25Q7Z3Z0 450 aa20.82■□□□□ 0.92
PDE4C-208ENST00000595343 EXOC8Q8IYI6 725 aa20.82■□□□□ 0.92
PDE4C-208ENST00000595343 FAM20AQ96MK3 541 aa20.82■□□□□ 0.92
PDE4C-208ENST00000595343 SLKQ9H2G2 1235 aaPredicted RBP20.82■□□□□ 0.92
PDE4C-208ENST00000595343 ZSWIM6Q9HCJ5 1215 aa20.82■□□□□ 0.92
PDE4C-208ENST00000595343 KCNMB3Q9NPA1 279 aa20.82■□□□□ 0.92
PDE4C-208ENST00000595343 PPME1Q9Y570 386 aa20.82■□□□□ 0.92
PDE4C-208ENST00000595343 C2orf16Q68DN1 1984 aa20.81■□□□□ 0.92
PDE4C-208ENST00000595343 C2CD2LO14523 706 aa20.81■□□□□ 0.92
PDE4C-208ENST00000595343 PI15O43692 258 aa20.81■□□□□ 0.92
PDE4C-208ENST00000595343 SOD2P04179 222 aa20.81■□□□□ 0.92
PDE4C-208ENST00000595343 NCLP19338 710 aaKnown RBP20.81■□□□□ 0.92
PDE4C-208ENST00000595343 AOC1P19801 751 aa20.81■□□□□ 0.92
PDE4C-208ENST00000595343 RFC5P40937 340 aa20.81■□□□□ 0.92
PDE4C-208ENST00000595343 FRMD5Q7Z6J6 570 aa20.81■□□□□ 0.92
PDE4C-208ENST00000595343 CMASQ8NFW8 434 aaPredicted RBP20.81■□□□□ 0.92
PDE4C-208ENST00000595343 ZNF274Q96GC6 653 aaPredicted RBP20.81■□□□□ 0.92
PDE4C-208ENST00000595343 MAN1C1Q9NR34 630 aa20.81■□□□□ 0.92
PDE4C-208ENST00000595343 BMP2KQ9NSY1 1161 aaPredicted RBP20.81■□□□□ 0.92
PDE4C-208ENST00000595343 DUSP12Q9UNI6 340 aa20.81■□□□□ 0.92
PDE4C-208ENST00000595343 DMDP11532 3685 aa20.81■□□□□ 0.92
PDE4C-208ENST00000595343 VPS13AQ96RL7 3174 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 REC8O95072 547 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 URODP06132 367 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 AK2P54819 239 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 TAS1R1Q7RTX1 841 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 RNF149Q8NC42 400 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 SMG8Q8ND04 991 aaKnown RBP20.8■□□□□ 0.92
PDE4C-208ENST00000595343 NKD2Q969F2 451 aaPredicted RBP20.8■□□□□ 0.92
PDE4C-208ENST00000595343 RPS6KC1Q96S38 1066 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 LARP6Q9BRS8 491 aaKnown RBP20.8■□□□□ 0.92
PDE4C-208ENST00000595343 HERC2P3Q9BVR0 1158 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 UBN1Q9NPG3 1134 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 MARCH5Q9NX47 278 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 IGSF9Q9P2J2 1179 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 FBXL21Q9UKT6 434 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 KCNJ14Q9UNX9 436 aa20.8■□□□□ 0.92
PDE4C-208ENST00000595343 PRG3Q9Y2Y8 225 aaPredicted RBP20.8■□□□□ 0.92
PDE4C-208ENST00000595343 TEX28O15482 410 aa20.79■□□□□ 0.92
PDE4C-208ENST00000595343 ASAP2O43150 1006 aa20.79■□□□□ 0.92
PDE4C-208ENST00000595343 N4BP1O75113 896 aaKnown RBP20.79■□□□□ 0.92
PDE4C-208ENST00000595343 ITGA4P13612 1032 aa20.79■□□□□ 0.92
PDE4C-208ENST00000595343 STK3Q13188 491 aa20.79■□□□□ 0.92
PDE4C-208ENST00000595343 EMC2Q15006 297 aa20.79■□□□□ 0.92
PDE4C-208ENST00000595343 PPP4R3AQ6IN85 833 aa20.79■□□□□ 0.92
PDE4C-208ENST00000595343 CPLX2Q6PUV4 134 aaKnown RBP20.79■□□□□ 0.92
PDE4C-208ENST00000595343 FERMT3Q86UX7 667 aa20.79■□□□□ 0.92
PDE4C-208ENST00000595343 C4orf19Q8IY42 314 aa20.79■□□□□ 0.92
PDE4C-208ENST00000595343 COLGALT2Q8IYK4 626 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms