RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ACLYP53396 1101 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 ADAM9Q13443 819 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 KRT31Q15323 416 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 FSCN1Q16658 493 aaKnown RBP14.77□□□□□ -0.05
VMP1-217ENST00000593168 ANKRD33Q7Z3H0 272 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 RETREG2Q8NC44 543 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 ASAP3Q8TDY4 903 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 NAP1L5Q96NT1 182 aaPredicted RBP14.77□□□□□ -0.05
VMP1-217ENST00000593168 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.77□□□□□ -0.059e-8■■■■■ 27.7
VMP1-217ENST00000593168 UPF3AQ9H1J1 476 aaKnown RBP14.77□□□□□ -0.05
VMP1-217ENST00000593168 ZNF576Q9H609 170 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 SPC25Q9HBM1 224 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 ARHGAP28Q9P2N2 729 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 EXOC7Q9UPT5 735 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 GBF1Q92538 1859 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 ZMYM2Q9UBW7 1377 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 DENND3A2RUS2 1198 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 MYADML2A6NDP7 307 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 RRN3P2A6NIE6 340 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 HAS3O00219 553 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 ASAP2O43150 1006 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 C22orf31O95567 290 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 KLRC1P26715 233 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 DNM2P50570 870 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 COPB1P53618 953 aaKnown RBP14.76□□□□□ -0.05
VMP1-217ENST00000593168 MARSP56192 900 aaKnown RBP14.76□□□□□ -0.05
VMP1-217ENST00000593168 IRX5P78411 483 aaPredicted RBP14.76□□□□□ -0.05
VMP1-217ENST00000593168 PPFIA1Q13136 1202 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
VMP1-217ENST00000593168 MXD4Q14582 209 aaPredicted RBP14.76□□□□□ -0.05
VMP1-217ENST00000593168 C16orf59Q7L2K0 433 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 SLC9A9Q8IVB4 645 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 KSR1Q8IVT5 923 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 C12orf56Q8IXR9 622 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 SYCP3Q8IZU3 236 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 PSPC1Q8WXF1 523 aaKnown RBP14.76□□□□□ -0.05
VMP1-217ENST00000593168 KAT2BQ92831 832 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 CNOT6LQ96LI5 555 aaKnown RBP14.76□□□□□ -0.05
VMP1-217ENST00000593168 TOX2Q96NM4 488 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 TSEN34Q9BSV6 310 aaKnown RBP14.76□□□□□ -0.05
VMP1-217ENST00000593168 SUGCTQ9HAC7 445 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 RTN4Q9NQC3 1192 aaKnown RBP14.76□□□□□ -0.05
VMP1-217ENST00000593168 STARD7Q9NQZ5 370 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 TBX20Q9UMR3 447 aa14.76□□□□□ -0.05
VMP1-217ENST00000593168 GRXCR1A8MXD5 290 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 DCDC2CA8MYV0 355 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 GOLGA6L6A8MZA4 724 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 TNFRSF10AO00220 468 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 N4BP3O15049 544 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 TIMP1P01033 207 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 NR3C1P04150 777 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 NR2F2P24468 414 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 PBX2P40425 430 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 GRIK4Q16099 956 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 KCNA10Q16322 511 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 CCSAPQ6IQ19 270 aaPredicted RBP14.75□□□□□ -0.05
VMP1-217ENST00000593168 EFCAB12Q6NXP0 572 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 CREBRFQ8IUR6 639 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 MAP4K3Q8IVH8 894 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 DRC7Q8IY82 874 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 LINC01465Q8N7H1 131 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 KLHDC9Q8NEP7 349 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 TRAPPC12Q8WVT3 735 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 PRPF31Q8WWY3 499 aaKnown RBP14.75□□□□□ -0.05
VMP1-217ENST00000593168 TIFAQ96CG3 184 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 TUBGCP2Q9BSJ2 902 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 KATNAL1Q9BW62 490 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 TMEM134Q9H6X4 195 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 AGPAT3Q9NRZ7 376 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 DMAC2Q9NW81 257 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 SUCLA2Q9P2R7 463 aaPredicted RBP14.75□□□□□ -0.05
VMP1-217ENST00000593168 TBX21Q9UL17 535 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 CHD9Q3L8U1 2897 aa14.75□□□□□ -0.05
VMP1-217ENST00000593168 PHLPP2Q6ZVD8 1323 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 ADGRA3Q8IWK6 1321 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 NRCAMQ92823 1304 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 ZEB2O60315 1214 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 TPM2P07951 284 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 MYL3P08590 195 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 COL9A1P20849 921 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 TMOD1P28289 359 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 MTIF2P46199 727 aaKnown RBP14.74□□□□□ -0.05
VMP1-217ENST00000593168 PSEN2P49810 448 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 BEX3Q00994 111 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 POU5F1BQ06416 359 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 DRP2Q13474 957 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 MFSD10Q14728 455 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 KIAA0753Q2KHM9 967 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 MFSD5Q6N075 450 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 MTHFD1LQ6UB35 978 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 FRMD5Q7Z6J6 570 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 LRRC71Q8N4P6 559 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 DEPTORQ8TB45 409 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 PPM1EQ8WY54 764 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 EEF2KMTQ96G04 330 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 MKNK1Q9BUB5 465 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 KIFC3Q9BVG8 833 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 PBX4Q9BYU1 374 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 VPS16Q9H269 839 aa14.74□□□□□ -0.05
VMP1-217ENST00000593168 INTS13Q9NVM9 706 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms