RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 PLA2G4FQ68DD2 849 aa20.37■□□□□ 0.85
HDAC5-212ENST00000593013 CC2D1AQ6P1N0 951 aaPredicted RBP20.37■□□□□ 0.85
HDAC5-212ENST00000593013 MAEAQ7L5Y9 396 aa20.37■□□□□ 0.85
HDAC5-212ENST00000593013 FMNL3Q8IVF7 1028 aa20.37■□□□□ 0.85
HDAC5-212ENST00000593013 SPIRE2Q8WWL2 714 aa20.37■□□□□ 0.85
HDAC5-212ENST00000593013 IVNS1ABPQ9Y6Y0 642 aa20.37■□□□□ 0.85
HDAC5-212ENST00000593013 PLXNA1Q9UIW2 1896 aa20.37■□□□□ 0.85
HDAC5-212ENST00000593013 P4HA2O15460 535 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 FERP16591 822 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 NPEPPSP55786 919 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 RTP1P59025 263 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 LACTBP83111 547 aaPredicted RBP20.36■□□□□ 0.85
HDAC5-212ENST00000593013 CBWD6Q4V339 395 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 CBWD3Q5JTY5 395 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 CBWD5Q5RIA9 395 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 MORN1Q5T089 497 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 ZNF571Q7Z3V5 609 aaPredicted RBP20.36■□□□□ 0.85
HDAC5-212ENST00000593013 KIFAP3Q92845 792 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 ARID3AQ99856 593 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 PDLIM7Q9NR12 457 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 GABBR1Q9UBS5 961 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 SLC9A2Q9UBY0 812 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 IGSF9BQ9UPX0 1349 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 SLC15A5A6NIM6 579 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 PMM2O15305 246 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 N4BP1O75113 896 aaKnown RBP20.36■□□□□ 0.85
HDAC5-212ENST00000593013 KRT13P13646 458 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 MYL7Q01449 175 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 ITIH3Q06033 890 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 ABHD15Q6UXT9 468 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 MAP4K3Q8IVH8 894 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 TMEM161BQ8NDZ6 487 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 HNRNPLLQ8WVV9 542 aaKnown RBP20.36■□□□□ 0.85
HDAC5-212ENST00000593013 NTPCRQ9BSD7 190 aaKnown RBP20.36■□□□□ 0.85
HDAC5-212ENST00000593013 STK33Q9BYT3 514 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 INTS2Q9H0H0 1204 aaKnown RBP20.36■□□□□ 0.85
HDAC5-212ENST00000593013 GPRC5CQ9NQ84 441 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 TSKSQ9UJT2 592 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 EXOC7Q9UPT5 735 aa20.36■□□□□ 0.85
HDAC5-212ENST00000593013 ZSWIM8A7E2V4 1837 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 TRIM49P0CI25 452 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 TRIM49CP0CI26 452 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 STAT1P42224 750 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 PEX3P56589 373 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 CAP1Q01518 475 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 SP3Q02447 781 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 ARID5AQ03989 594 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 ZNF792Q3KQV3 632 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 FAM102BQ5T8I3 360 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 XXYLT1Q8NBI6 393 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 NOA1Q8NC60 698 aaKnown RBP20.35■□□□□ 0.85
HDAC5-212ENST00000593013 MMS19Q96T76 1030 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 HSPBP1Q9NZL4 362 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 ADAMTS1Q9UHI8 967 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 HYOU1Q9Y4L1 999 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 PCDHGC5Q9Y5F6 944 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 SIP14410 1827 aa20.35■□□□□ 0.85
HDAC5-212ENST00000593013 F8VZ95 297 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 SLC16A4O15374 487 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 SRGAP2O75044 1071 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 EIF3JO75822 258 aaKnown RBP20.34■□□□□ 0.85
HDAC5-212ENST00000593013 PNMA6AP0CW24 399 aaPredicted RBP20.34■□□□□ 0.85
HDAC5-212ENST00000593013 TCP1P17987 556 aaKnown RBP20.34■□□□□ 0.85
HDAC5-212ENST00000593013 EDNRBP24530 442 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 ALDH5A1P51649 535 aaPredicted RBP20.34■□□□□ 0.85
HDAC5-212ENST00000593013 SMTNP53814 917 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 ACTR2P61160 394 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 DMP1Q13316 513 aaPredicted RBP20.34■□□□□ 0.85
HDAC5-212ENST00000593013 MCPH1Q8NEM0 835 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 LMO3Q8TAP4 145 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 USP6NLQ92738 828 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 KCNN1Q92952 543 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 CBWD1Q9BRT8 395 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.34■□□□□ 0.85
HDAC5-212ENST00000593013 ARHGAP39Q9C0H5 1083 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 GJD2Q9UKL4 321 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 USP20Q9Y2K6 914 aa20.34■□□□□ 0.85
HDAC5-212ENST00000593013 SPDYE4A6NLX3 237 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 DGAT1O75907 488 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 ATG7O95352 703 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 SUPT20HL2P0C7V6 817 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 SOX5P35711 763 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 NPTX2P47972 431 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 STXBP2Q15833 593 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 MIS18BP1Q6P0N0 1132 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 GJB7Q6PEY0 223 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 CCDC60Q8IWA6 550 aaPredicted RBP20.33■□□□□ 0.85
HDAC5-212ENST00000593013 KRT222Q8N1A0 295 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 OLIG1Q8TAK6 271 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 VTI1AQ96AJ9 217 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 PNKPQ96T60 521 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 SH2D3AQ9BRG2 576 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 ARFGAP3Q9NP61 516 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 APEX2Q9UBZ4 518 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 NAGPAQ9UK23 515 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 TBX20Q9UMR3 447 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 MCM3APO60318 1980 aa20.33■□□□□ 0.85
HDAC5-212ENST00000593013 TISP43B9A030 160 aa20.33■□□□□ 0.84
HDAC5-212ENST00000593013 GPR25O00155 361 aa20.33■□□□□ 0.84
HDAC5-212ENST00000593013 ECM2O94769 699 aaPredicted RBP20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms