RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 FAM86C2PA6NEL3 165 aa25.89■■□□□ 1.74
MBD3-211ENST00000592965 ERLIN2O94905 339 aa25.89■■□□□ 1.74
MBD3-211ENST00000592965 SPATA31C1P0DKV0 1188 aa25.89■■□□□ 1.74
MBD3-211ENST00000592965 AXLP30530 894 aa25.89■■□□□ 1.74
MBD3-211ENST00000592965 RBM25P49756 843 aaKnown RBP25.89■■□□□ 1.74
MBD3-211ENST00000592965 TMEM173Q86WV6 379 aaPredicted RBP25.89■■□□□ 1.74
MBD3-211ENST00000592965 MRPL43Q8N983 215 aaKnown RBP25.89■■□□□ 1.74
MBD3-211ENST00000592965 URGCPQ8TCY9 931 aa25.89■■□□□ 1.74
MBD3-211ENST00000592965 PIGOQ8TEQ8 1089 aa25.89■■□□□ 1.74
MBD3-211ENST00000592965 NFKBIZQ9BYH8 718 aa25.89■■□□□ 1.74
MBD3-211ENST00000592965 TUFT1Q9NNX1 390 aa25.89■■□□□ 1.74
MBD3-211ENST00000592965 C2orf71A6NGG8 1288 aa25.88■■□□□ 1.73
MBD3-211ENST00000592965 NT5C1B-RDH14C9J2C7 533 aa25.88■■□□□ 1.73
MBD3-211ENST00000592965 TSPAN1O60635 241 aa25.88■■□□□ 1.73
MBD3-211ENST00000592965 OR52Z1P0C646 297 aa25.88■■□□□ 1.73
MBD3-211ENST00000592965 NCLP19338 710 aaKnown RBP25.88■■□□□ 1.73
MBD3-211ENST00000592965 RNASELQ05823 741 aaKnown RBP25.88■■□□□ 1.73
MBD3-211ENST00000592965 CAPSQ13938 189 aa25.88■■□□□ 1.73
MBD3-211ENST00000592965 CNNM3Q8NE01 707 aa25.88■■□□□ 1.73
MBD3-211ENST00000592965 SUSD6Q92537 303 aa25.88■■□□□ 1.73
MBD3-211ENST00000592965 IGSF21Q96ID5 467 aa25.88■■□□□ 1.73
MBD3-211ENST00000592965 RSAD1Q9HA92 442 aa25.88■■□□□ 1.73
MBD3-211ENST00000592965 GALTP07902 379 aa25.87■■□□□ 1.73
MBD3-211ENST00000592965 GLRA2P23416 452 aa25.87■■□□□ 1.73
MBD3-211ENST00000592965 TRAPPC10P48553 1259 aa25.87■■□□□ 1.73
MBD3-211ENST00000592965 MBTD1Q05BQ5 628 aa25.87■■□□□ 1.73
MBD3-211ENST00000592965 BMS1Q14692 1282 aaKnown RBP25.87■■□□□ 1.73
MBD3-211ENST00000592965 ANKRD54Q6NXT1 300 aa25.87■■□□□ 1.73
MBD3-211ENST00000592965 NOTUMQ6P988 496 aa25.87■■□□□ 1.73
MBD3-211ENST00000592965 NOSTRINQ8IVI9 506 aa25.87■■□□□ 1.73
MBD3-211ENST00000592965 FAM184AQ8NB25 1140 aa25.87■■□□□ 1.73
MBD3-211ENST00000592965 POLR3CQ9BUI4 534 aaPredicted RBP25.87■■□□□ 1.73
MBD3-211ENST00000592965 ZBP1Q9H171 429 aa25.87■■□□□ 1.73
MBD3-211ENST00000592965 PRR33A8MZF0 331 aa25.86■■□□□ 1.73
MBD3-211ENST00000592965 INO80B-WBP1J3KQ70 363 aa25.86■■□□□ 1.73
MBD3-211ENST00000592965 B4GALT3O60512 393 aa25.86■■□□□ 1.73
MBD3-211ENST00000592965 HOXB8P17481 243 aaPredicted RBP25.86■■□□□ 1.73
MBD3-211ENST00000592965 TTC38Q5R3I4 469 aa25.86■■□□□ 1.73
MBD3-211ENST00000592965 DDX53Q86TM3 631 aaKnown RBP25.86■■□□□ 1.73
MBD3-211ENST00000592965 CATSPER3Q86XQ3 398 aa25.86■■□□□ 1.73
MBD3-211ENST00000592965 VPS52Q8N1B4 723 aa25.86■■□□□ 1.73
MBD3-211ENST00000592965 BCL7CQ8WUZ0 217 aaPredicted RBP25.86■■□□□ 1.73
MBD3-211ENST00000592965 POLR3FQ9H1D9 316 aaPredicted RBP25.86■■□□□ 1.73
MBD3-211ENST00000592965 UBN1Q9NPG3 1134 aa25.86■■□□□ 1.73
MBD3-211ENST00000592965 KANSL3Q9P2N6 904 aa25.86■■□□□ 1.73
MBD3-211ENST00000592965 DNAJB4Q9UDY4 337 aa25.86■■□□□ 1.73
MBD3-211ENST00000592965 DBR1Q9UK59 544 aaKnown RBP25.86■■□□□ 1.73
MBD3-211ENST00000592965 MUC6Q6W4X9 2439 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 LOC730098B7Z3J9 87 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 USO1O60763 962 aaKnown RBP25.85■■□□□ 1.73
MBD3-211ENST00000592965 MED24O75448 989 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 TECP42680 631 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 SLC11A1P49279 550 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 NCBP1Q09161 790 aaKnown RBP25.85■■□□□ 1.73
MBD3-211ENST00000592965 ZNF174Q15697 407 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 AMHR2Q16671 573 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 SYCE2Q6PIF2 218 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 ZNF280BQ86YH2 543 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 RNF135Q8IUD6 432 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 SMG8Q8ND04 991 aaKnown RBP25.85■■□□□ 1.73
MBD3-211ENST00000592965 ERMNQ8TAM6 284 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 CASP10Q92851 521 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 PHF7Q9BWX1 381 aaPredicted RBP25.85■■□□□ 1.73
MBD3-211ENST00000592965 S1PR5Q9H228 398 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 IRAK3Q9Y616 596 aa25.85■■□□□ 1.73
MBD3-211ENST00000592965 TDRD15B5MCY1 1934 aaKnown RBP25.84■■□□□ 1.73
MBD3-211ENST00000592965 A0A087WWV3 80 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 INPPL1O15357 1258 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 CTSAP10619 480 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 RPA1P27694 616 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 GNL2Q13823 731 aaKnown RBP25.84■■□□□ 1.73
MBD3-211ENST00000592965 CBX2Q14781 532 aaPredicted RBP25.84■■□□□ 1.73
MBD3-211ENST00000592965 HERC4Q5GLZ8 1057 aaPredicted RBP25.84■■□□□ 1.73
MBD3-211ENST00000592965 LLGL2Q6P1M3 1020 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 MCPH1Q8NEM0 835 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 NACC1Q96RE7 527 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 TMEM175Q9BSA9 504 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 GBP3Q9H0R5 595 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 CSRNP2Q9H175 543 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 STK39Q9UEW8 545 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 HCN4Q9Y3Q4 1203 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 IPPQ9Y573 584 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 HCFC2Q9Y5Z7 792 aa25.84■■□□□ 1.73
MBD3-211ENST00000592965 CLASP2O75122 1294 aaKnown RBP25.83■■□□□ 1.73
MBD3-211ENST00000592965 CXCL14O95715 111 aa25.83■■□□□ 1.73
MBD3-211ENST00000592965 ITGA4P13612 1032 aa25.83■■□□□ 1.73
MBD3-211ENST00000592965 AFF1P51825 1210 aaKnown RBP25.83■■□□□ 1.73
MBD3-211ENST00000592965 GIT2Q14161 759 aa25.83■■□□□ 1.73
MBD3-211ENST00000592965 RABEP1Q15276 862 aa25.83■■□□□ 1.73
MBD3-211ENST00000592965 POTEGQ6S5H5 508 aa25.83■■□□□ 1.73
MBD3-211ENST00000592965 CPB2Q96IY4 423 aa25.83■■□□□ 1.73
MBD3-211ENST00000592965 VN1R3Q9BXE9 311 aa25.83■■□□□ 1.73
MBD3-211ENST00000592965 EIF2AQ9BY44 585 aaKnown RBP25.83■■□□□ 1.73
MBD3-211ENST00000592965 MUTYHQ9UIF7 546 aa25.83■■□□□ 1.73
MBD3-211ENST00000592965 NOL7Q9UMY1 257 aaKnown RBP25.83■■□□□ 1.73
MBD3-211ENST00000592965 ARIH1Q9Y4X5 557 aaPredicted RBP25.83■■□□□ 1.73
MBD3-211ENST00000592965 TECTAO75443 2155 aa25.83■■□□□ 1.73
MBD3-211ENST00000592965 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.82■■□□□ 1.72
MBD3-211ENST00000592965 DDHD2O94830 711 aa25.82■■□□□ 1.72
MBD3-211ENST00000592965 ARF4P18085 180 aaPredicted RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms