RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 PIGOQ8TEQ8 1089 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 ZSWIM1Q9BR11 485 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 ODF2LQ9ULJ1 636 aa16.02■□□□□ 0.15
SMARCA4-219ENST00000592604 IGLV3-22A0A075B6J6 115 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 RAD21O60216 631 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 RARGP13631 454 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 SLMAPQ14BN4 828 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 CYP1B1Q16678 543 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 STXBP4Q6ZWJ1 553 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 SLC9A9Q8IVB4 645 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 KRT35Q92764 455 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 VTI1AQ96AJ9 217 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 CRAMP1Q96RY5 1269 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 STMN4Q9H169 189 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 OPLAHO14841 1288 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 TRIM49P0CI25 452 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 TRIM49CP0CI26 452 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 ELF1P32519 619 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 ARHGAP44Q17R89 818 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 MSL1Q68DK7 614 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 APOBEC3HQ6NTF7 200 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 TTC27Q6P3X3 843 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 OTOP1Q7RTM1 612 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 MORC4Q8TE76 937 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 SEPT11Q9NVA2 429 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 DONSONQ9NYP3 566 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 SAMD15Q9P1V8 674 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 LRRC37AA6NMS7 1700 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 RIPK2O43353 540 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 LY75O60449 1722 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 NF2P35240 595 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 NFIAQ12857 509 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 TMEM132AQ24JP5 1023 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 MFSD5Q6N075 450 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 CEP57Q86XR8 500 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 ART4Q93070 314 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 FAM212AQ96EL1 285 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 CTTNBP2NLQ9P2B4 639 aa16.01■□□□□ 0.15
SMARCA4-219ENST00000592604 SIPA1L1O43166 1804 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 MTA2O94776 668 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 FTLP02792 175 aaPredicted RBP16■□□□□ 0.15
SMARCA4-219ENST00000592604 BCRP11274 1271 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 EZRP15311 586 aaKnown RBP16■□□□□ 0.15
SMARCA4-219ENST00000592604 GPC5P78333 572 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 BFSP1Q12934 665 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 RIPK1Q13546 671 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 MYBPC2Q14324 1141 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 CCDC137Q6PK04 289 aaKnown RBP16■□□□□ 0.15
SMARCA4-219ENST00000592604 KSR1Q8IVT5 923 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 RUNDC3BQ96NL0 473 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 SCLT1Q96NL6 688 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 PRMT1Q99873 361 aaKnown RBP16■□□□□ 0.15
SMARCA4-219ENST00000592604 ROPN1BQ9BZX4 212 aaPredicted RBP16■□□□□ 0.15
SMARCA4-219ENST00000592604 ROPN1Q9HAT0 212 aaPredicted RBP16■□□□□ 0.15
SMARCA4-219ENST00000592604 PIK3CDO00329 1044 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 ATP6V1G2O95670 118 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 MUTP22033 750 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 ZNF76P36508 570 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 CYP2J2P51589 502 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 SNAP25P60880 206 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 AUHQ13825 339 aaKnown RBP16■□□□□ 0.15
SMARCA4-219ENST00000592604 USH1GQ495M9 461 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 CERKLQ49MI3 558 aaPredicted RBP16■□□□□ 0.15
SMARCA4-219ENST00000592604 HIBCHQ6NVY1 386 aaPredicted RBP16■□□□□ 0.15
SMARCA4-219ENST00000592604 FAM196AQ6ZSG2 479 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 CYFIP1Q7L576 1253 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 TRPM8Q7Z2W7 1104 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 TPH2Q8IWU9 490 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 ZFPM1Q8IX07 1006 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 FAM178BQ8IXR5 827 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 DYDC2Q96IM9 177 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 STRA6Q9BX79 667 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 WNT8AQ9H1J5 351 aa16■□□□□ 0.15
SMARCA4-219ENST00000592604 F5H6K3 240 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 RASGRF2O14827 1237 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 SERPINB2P05120 415 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 MARCKSL1P49006 195 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 PPP1R7Q15435 360 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 CNGA2Q16280 664 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 ZNF568Q3ZCX4 644 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 UBAP2Q5T6F2 1119 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 GMCL1P1Q8NEA9 526 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 EPS8L3Q8TE67 593 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 SLC20A1Q8WUM9 679 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 CD101Q93033 1021 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 GMCL1Q96IK5 515 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 ELAC2Q9BQ52 826 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 NSRP1Q9H0G5 558 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 KCND2Q9NZV8 630 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 MYH11P35749 1972 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 CFAP73A6NFT4 308 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 RIMBP2O15034 1052 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 PSMD10O75832 226 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 SCNN1DP51172 638 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 PPP2R5CQ13362 524 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 SHROOM1Q2M3G4 852 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 SEL1L2Q5TEA6 688 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 SYDE2Q5VT97 1194 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 TAOK1Q7L7X3 1001 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 SP8Q8IXZ3 490 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms