RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 JADE2Q9NQC1 790 aa8.4□□□□□ -1.06
VAT1-209ENST00000592388 MAN1C1Q9NR34 630 aa8.4□□□□□ -1.06
VAT1-209ENST00000592388 FAM217BQ9NTX9 383 aaPredicted RBP8.4□□□□□ -1.06
VAT1-209ENST00000592388 ERAP1Q9NZ08 941 aa8.4□□□□□ -1.06
VAT1-209ENST00000592388 WASF3Q9UPY6 502 aa8.4□□□□□ -1.06
VAT1-209ENST00000592388 DSPP15924 2871 aaKnown RBP8.4□□□□□ -1.06
VAT1-209ENST00000592388 KDM3AQ9Y4C1 1321 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 KLF18A0A0U1RQI7 1052 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 RRN3P2A6NIE6 340 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 DDX39AO00148 427 aaKnown RBP8.39□□□□□ -1.07
VAT1-209ENST00000592388 INPPL1O15357 1258 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 NCAM2O15394 837 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 ZBTB43O43298 467 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 HRO43593 1189 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 RFPL2O75678 378 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 SSBP05455 408 aaKnown RBP eCLIP8.39□□□□□ -1.07
VAT1-209ENST00000592388 CNPP09543 421 aaKnown RBP8.39□□□□□ -1.07
VAT1-209ENST00000592388 TDGF1P13385 188 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 EXOSC10Q01780 885 aaKnown RBP8.39□□□□□ -1.07
VAT1-209ENST00000592388 ITGB3BPQ13352 177 aaPredicted RBP8.39□□□□□ -1.07
VAT1-209ENST00000592388 CLLU1OSQ5K130 101 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 PARM1Q6UWI2 310 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 CENPQQ7L2Z9 268 aaPredicted RBP8.39□□□□□ -1.07
VAT1-209ENST00000592388 CMASQ8NFW8 434 aaPredicted RBP8.39□□□□□ -1.07
VAT1-209ENST00000592388 SEPT1Q8WYJ6 367 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 SMG7Q92540 1137 aaKnown RBP8.39□□□□□ -1.07
VAT1-209ENST00000592388 FGF14Q92915 247 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 CDHR1Q96JP9 859 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 PPP1R16BQ96T49 567 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 EMILIN2Q9BXX0 1053 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 KCNH7Q9NS40 1196 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 RBM28Q9NW13 759 aaKnown RBP8.39□□□□□ -1.07
VAT1-209ENST00000592388 NAP1L2Q9ULW6 460 aaPredicted RBP8.39□□□□□ -1.07
VAT1-209ENST00000592388 PCDHA2Q9Y5H9 948 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 ADAMTS20P59510 1910 aa8.39□□□□□ -1.07
VAT1-209ENST00000592388 DMXL2Q8TDJ6 3036 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 NBEAQ8NFP9 2946 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 AXIN1O15169 862 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 GPR182O15218 404 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 ZC3H11AO75152 810 aaKnown RBP eCLIP8.38□□□□□ -1.07
VAT1-209ENST00000592388 CDC45O75419 566 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 CCNE2O96020 404 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 RPS9P46781 194 aaKnown RBP8.38□□□□□ -1.07
VAT1-209ENST00000592388 ADCY7P51828 1080 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 ACTR2P61160 394 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 FZD5Q13467 585 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 PLCB4Q15147 1175 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 COL28A1Q2UY09 1125 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 JAKMIP3Q5VZ66 844 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 SYNE3Q6ZMZ3 975 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 TPRG1Q6ZUI0 275 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 DHX32Q7L7V1 743 aaKnown RBP8.38□□□□□ -1.07
VAT1-209ENST00000592388 DDX53Q86TM3 631 aaKnown RBP8.38□□□□□ -1.07
VAT1-209ENST00000592388 FAM228AQ86W67 206 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 FAM160A2Q8N612 972 aaPredicted RBP8.38□□□□□ -1.07
VAT1-209ENST00000592388 GIMAP8Q8ND71 665 aaPredicted RBP8.38□□□□□ -1.07
VAT1-209ENST00000592388 HELQQ8TDG4 1101 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 NELL2Q99435 816 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 MXRA8Q9BRK3 442 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 ARRDC1-AS1Q9H2J1 176 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 PIDD1Q9HB75 910 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 AGO4Q9HCK5 861 aaKnown RBP8.38□□□□□ -1.07
VAT1-209ENST00000592388 RIC8AQ9NPQ8 531 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 IGSF5Q9NSI5 407 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.38□□□□□ -1.073e-12■■□□□ 11.9
VAT1-209ENST00000592388 SLC9A2Q9UBY0 812 aa8.38□□□□□ -1.07
VAT1-209ENST00000592388 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
VAT1-209ENST00000592388 BPTFQ12830 3046 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 SMCO2A6NFE2 343 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 CHURC1-FNTBB4DL54 471 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 FAM86B1E9PN63 330 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 FAM86B2P0C5J1 330 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 ADD1P35611 737 aaKnown RBP8.37□□□□□ -1.07
VAT1-209ENST00000592388 SREBF1P36956 1147 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 FNTBP49356 437 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 CLK2P49760 499 aaKnown RBP8.37□□□□□ -1.07
VAT1-209ENST00000592388 POLGP54098 1239 aaPredicted RBP8.37□□□□□ -1.07
VAT1-209ENST00000592388 DSC3Q14574 896 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 PPP2R5DQ14738 602 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 CEP55Q53EZ4 464 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 ODR4Q5SWX8 454 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 KIAA1211LQ6NV74 962 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 PPP1R18Q6NYC8 613 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 RSPO2Q6UXX9 243 aaPredicted RBP8.37□□□□□ -1.07
VAT1-209ENST00000592388 CCDC60Q8IWA6 550 aaPredicted RBP8.37□□□□□ -1.07
VAT1-209ENST00000592388 NME8Q8N427 588 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 BCL7CQ8WUZ0 217 aaPredicted RBP8.37□□□□□ -1.07
VAT1-209ENST00000592388 IGSF21Q96ID5 467 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 JAKMIP1Q96N16 626 aaKnown RBP8.37□□□□□ -1.07
VAT1-209ENST00000592388 SDF4Q9BRK5 362 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 SMOC1Q9H4F8 434 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 SMARCAD1Q9H4L7 1026 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 BARHL2Q9NY43 387 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 NDRG2Q9UN36 371 aaKnown RBP8.37□□□□□ -1.07
VAT1-209ENST00000592388 GPSM3Q9Y4H4 160 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 CELSR3Q9NYQ7 3312 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 ASXL3Q9C0F0 2248 aa8.37□□□□□ -1.07
VAT1-209ENST00000592388 NFASCO94856 1347 aa8.36□□□□□ -1.07
VAT1-209ENST00000592388 IGLV3-22A0A075B6J6 115 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms