RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ANKEF1Q9NU02 776 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 RGL1Q9NZL6 768 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 TRIOO75962 3097 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 DGAT1O75907 488 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 SRGAP2CP0DJJ0 459 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 NCLP19338 710 aaKnown RBP21.03■□□□□ 0.96
CCDC43-205ENST00000592333 MTHFRP42898 656 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 SIGLEC14Q08ET2 396 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 NR5A1Q13285 461 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 TRIM29Q14134 588 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 TFDP1Q14186 410 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 AGMOQ6ZNB7 445 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 TPH2Q8IWU9 490 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 TMEM87AQ8NBN3 555 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 RNF149Q8NC42 400 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 LPPQ93052 612 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 RSAD1Q9HA92 442 aa21.03■□□□□ 0.96
CCDC43-205ENST00000592333 NT5C1B-RDH14C9J2C7 533 aa21.02■□□□□ 0.96
CCDC43-205ENST00000592333 INPPL1O15357 1258 aa21.02■□□□□ 0.96
CCDC43-205ENST00000592333 ERLIN2O94905 339 aa21.02■□□□□ 0.96
CCDC43-205ENST00000592333 ALDH2P05091 517 aa21.02■□□□□ 0.96
CCDC43-205ENST00000592333 PTENP60484 403 aa21.02■□□□□ 0.96
CCDC43-205ENST00000592333 CACNB1Q02641 598 aaPredicted RBP21.02■□□□□ 0.96
CCDC43-205ENST00000592333 CTTNQ14247 550 aaKnown RBP21.02■□□□□ 0.96
CCDC43-205ENST00000592333 CALCRLQ16602 461 aa21.02■□□□□ 0.96
CCDC43-205ENST00000592333 NSUN7Q8NE18 718 aaKnown RBP21.02■□□□□ 0.96
CCDC43-205ENST00000592333 RIPOR3Q96MK2 946 aa21.02■□□□□ 0.96
CCDC43-205ENST00000592333 EIF2AK1Q9BQI3 630 aaKnown RBP21.02■□□□□ 0.96
CCDC43-205ENST00000592333 TTC12Q9H892 705 aaPredicted RBP21.02■□□□□ 0.96
CCDC43-205ENST00000592333 MINDY3Q9H8M7 445 aa21.02■□□□□ 0.96
CCDC43-205ENST00000592333 PIEZO1Q92508 2521 aa21.02■□□□□ 0.95
CCDC43-205ENST00000592333 TMEM221A6NGB7 291 aa21.01■□□□□ 0.95
CCDC43-205ENST00000592333 M0R296 226 aa21.01■□□□□ 0.95
CCDC43-205ENST00000592333 NEMFO60524 1076 aa21.01■□□□□ 0.95
CCDC43-205ENST00000592333 UBXN11Q5T124 520 aa21.01■□□□□ 0.95
CCDC43-205ENST00000592333 LLGL2Q6P1M3 1020 aa21.01■□□□□ 0.95
CCDC43-205ENST00000592333 FAM193BQ96PV7 902 aaPredicted RBP21.01■□□□□ 0.95
CCDC43-205ENST00000592333 MTMR9Q96QG7 549 aa21.01■□□□□ 0.95
CCDC43-205ENST00000592333 SSX2IPQ9Y2D8 614 aa21.01■□□□□ 0.95
CCDC43-205ENST00000592333 TECTAO75443 2155 aa21.01■□□□□ 0.95
CCDC43-205ENST00000592333 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21■□□□□ 0.95
CCDC43-205ENST00000592333 MEIS3P2A8K0S8 358 aa21■□□□□ 0.95
CCDC43-205ENST00000592333 BTBD18B2RXH4 712 aa21■□□□□ 0.95
CCDC43-205ENST00000592333 NEK4P51957 841 aa21■□□□□ 0.95
CCDC43-205ENST00000592333 CYP4A11Q02928 519 aa21■□□□□ 0.95
CCDC43-205ENST00000592333 ORC2Q13416 577 aaPredicted RBP21■□□□□ 0.95
CCDC43-205ENST00000592333 PTPN21Q16825 1174 aa21■□□□□ 0.95
CCDC43-205ENST00000592333 NOTUMQ6P988 496 aa21■□□□□ 0.95
CCDC43-205ENST00000592333 TMEM173Q86WV6 379 aaPredicted RBP21■□□□□ 0.95
CCDC43-205ENST00000592333 DIS3L2Q8IYB7 885 aaKnown RBP21■□□□□ 0.95
CCDC43-205ENST00000592333 NECAB1Q8N987 351 aa21■□□□□ 0.95
CCDC43-205ENST00000592333 XPNPEP1Q9NQW7 623 aa21■□□□□ 0.95
CCDC43-205ENST00000592333 INPP5FQ9Y2H2 1132 aa21■□□□□ 0.95
CCDC43-205ENST00000592333 ZNF318Q5VUA4 2279 aa21■□□□□ 0.95
CCDC43-205ENST00000592333 ZMYM2Q9UBW7 1377 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 ARL2P36404 184 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 SLC11A1P49279 550 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 ATAT1Q5SQI0 421 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 HACE1Q8IYU2 909 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 SLC22A17Q8WUG5 538 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 PBXIP1Q96AQ6 731 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 FBXL18Q96ME1 805 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 EMILIN2Q9BXX0 1053 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 DNAJB4Q9UDY4 337 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 USTQ9Y2C2 406 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 FAN1Q9Y2M0 1017 aa20.99■□□□□ 0.95
CCDC43-205ENST00000592333 FAM205CA6NFA0 338 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 ZBTB39O15060 712 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 TSPAN1O60635 241 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 C1RP00736 705 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 ITGA4P13612 1032 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 RARRES1P49788 294 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 PTPN14Q15678 1187 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 KIAA1841Q6NSI8 718 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 ZNF280BQ86YH2 543 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 SUGP1Q8IWZ8 645 aaKnown RBP20.98■□□□□ 0.95
CCDC43-205ENST00000592333 CCDC43Q96MW1 224 aaKnown RBP20.98■□□□□ 0.95
CCDC43-205ENST00000592333 CSRNP2Q9H175 543 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 ARID2Q68CP9 1835 aa20.98■□□□□ 0.95
CCDC43-205ENST00000592333 DDHD2O94830 711 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 LARGE1O95461 756 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 TXKP42681 527 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 NUBP1P53384 320 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 SAFBQ15424 915 aaKnown RBP eCLIP20.97■□□□□ 0.95
CCDC43-205ENST00000592333 LONRF3Q496Y0 759 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 GPR65Q8IYL9 337 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 UBALD2Q8IYN6 164 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 PLCD3Q8N3E9 789 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 FBXL6Q8N531 539 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 SMG8Q8ND04 991 aaKnown RBP20.97■□□□□ 0.95
CCDC43-205ENST00000592333 LLPHQ9BRT6 129 aaKnown RBP20.97■□□□□ 0.95
CCDC43-205ENST00000592333 GBP3Q9H0R5 595 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 TUFT1Q9NNX1 390 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 DPP7Q9UHL4 492 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 GIT1Q9Y2X7 761 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 IPPQ9Y573 584 aa20.97■□□□□ 0.95
CCDC43-205ENST00000592333 INO80B-WBP1J3KQ70 363 aa20.96■□□□□ 0.95
CCDC43-205ENST00000592333 NRP1O14786 923 aa20.96■□□□□ 0.95
CCDC43-205ENST00000592333 LILRB3O75022 631 aa20.96■□□□□ 0.95
CCDC43-205ENST00000592333 NR1I2O75469 434 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms