RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 TCF20Q9UGU0 1960 aaKnown RBP15.43■□□□□ 0.06
CLIP3-205ENST00000592017 LOXHD1Q8IVV2 1947 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 MEIS3P2A8K0S8 358 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 EYA4O95677 639 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 CYP11B2P19099 503 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 MARCKSP29966 332 aaPredicted RBP15.42■□□□□ 0.06
CLIP3-205ENST00000592017 HOXA11P31270 313 aaPredicted RBP15.42■□□□□ 0.06
CLIP3-205ENST00000592017 PTENP60484 403 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 UBE3AQ05086 875 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 CLUL1Q15846 466 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 CSPP1Q1MSJ5 1256 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 PUS10Q3MIT2 529 aaKnown RBP15.42■□□□□ 0.06
CLIP3-205ENST00000592017 LONRF3Q496Y0 759 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 KCNT2Q6UVM3 1135 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 RBM23Q86U06 439 aaKnown RBP15.42■□□□□ 0.06
CLIP3-205ENST00000592017 FAM178BQ8IXR5 827 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 LRRC43Q8N309 656 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 KHSRPQ92945 711 aaKnown RBP eCLIP15.42■□□□□ 0.06
CLIP3-205ENST00000592017 AK8Q96MA6 479 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 PNMA5Q96PV4 448 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 POLD4Q9HCU8 107 aa15.42■□□□□ 0.06
CLIP3-205ENST00000592017 FSCN2O14926 492 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 ZNF623O75123 536 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 TBX10O75333 385 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 LIG1P18858 919 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 LONP1P36776 959 aaKnown RBP15.41■□□□□ 0.06
CLIP3-205ENST00000592017 UBA7P41226 1012 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 NRIP1P48552 1158 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 PLCB3Q01970 1234 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 PTPAQ15257 358 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 FOXD4L6Q3SYB3 417 aaPredicted RBP15.41■□□□□ 0.06
CLIP3-205ENST00000592017 UBXN11Q5T124 520 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 FOXD4L3Q6VB84 417 aaPredicted RBP15.41■□□□□ 0.06
CLIP3-205ENST00000592017 EFHBQ8N7U6 833 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 MICAL1Q8TDZ2 1067 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 BSNDQ8WZ55 320 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 CALML4Q96GE6 196 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 ZNF558Q96NG5 402 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 USP28Q96RU2 1077 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 NT5C3AQ9H0P0 336 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 TLR9Q9NR96 1032 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 FAM105AQ9NUU6 356 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 PCDHB2Q9Y5E7 798 aa15.41■□□□□ 0.06
CLIP3-205ENST00000592017 RALGAPA2Q2PPJ7 1873 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 PER2O15055 1255 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 TSPAN1O60635 241 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 OFD1O75665 1012 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 MBTD1Q05BQ5 628 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 KARSQ15046 597 aaKnown RBP15.4■□□□□ 0.06
CLIP3-205ENST00000592017 SPECC1Q5M775 1068 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 HYIQ5T013 277 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 MRPL10Q7Z7H8 261 aaKnown RBP15.4■□□□□ 0.06
CLIP3-205ENST00000592017 ZBTB8OSQ8IWT0 167 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 DEPTORQ8TB45 409 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 MRPS27Q92552 414 aaKnown RBP15.4■□□□□ 0.06
CLIP3-205ENST00000592017 CPB2Q96IY4 423 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 MSLNLQ96KJ4 702 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 KIFC3Q9BVG8 833 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 RUSC1Q9BVN2 902 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 CSRNP2Q9H175 543 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 EPHX3Q9H6B9 360 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 TLE6Q9H808 572 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 CLEC1BQ9P126 229 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 LZTS1Q9Y250 596 aa15.4■□□□□ 0.06
CLIP3-205ENST00000592017 HIP1RO75146 1068 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 GLP2RO95838 553 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 ZSCAN22P10073 491 aaPredicted RBP15.39■□□□□ 0.05
CLIP3-205ENST00000592017 SKIP12755 728 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 RAB27AP51159 221 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 BCAR1P56945 870 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 RBM10P98175 930 aaKnown RBP15.39■□□□□ 0.05
CLIP3-205ENST00000592017 POU5F1BQ06416 359 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 NCBP1Q09161 790 aaKnown RBP15.39■□□□□ 0.05
CLIP3-205ENST00000592017 RAD51AP2Q09MP3 1159 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 PKP1Q13835 747 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 TMEM132AQ24JP5 1023 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 TMEM119Q4V9L6 283 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 AGMOQ6ZNB7 445 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 IFNLR1Q8IU57 520 aaPredicted RBP15.39■□□□□ 0.05
CLIP3-205ENST00000592017 GJD3Q8N144 294 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 SLC39A11Q8N1S5 342 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 VN1R2Q8NFZ6 395 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 KIFAP3Q92845 792 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 PPP2R3CQ969Q6 453 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 IFT74Q96LB3 600 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 CLIC6Q96NY7 704 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 SPG21Q9NZD8 308 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 FBXO2Q9UK22 296 aaPredicted RBP15.39■□□□□ 0.05
CLIP3-205ENST00000592017 NLRC5Q86WI3 1866 aa15.39■□□□□ 0.05
CLIP3-205ENST00000592017 HIDE1A8MVS5 230 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 NT5C1B-RDH14C9J2C7 533 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 B4GALT5O43286 388 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 MBTPS2O43462 519 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 B4GALT3O60512 393 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 F13A1P00488 732 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 PLA2G4BP0C869 781 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 PLCG1P19174 1290 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 PPM1AP35813 382 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 NAMPTP43490 491 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 AFF1P51825 1210 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms