RNA–Protein interactions for RNA: ENST00000591960.1

RDH13-219, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 1,328 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-219ENST00000591960 SKIP12755 728 aa15.07■□□□□ 0
RDH13-219ENST00000591960 GUCY2CP25092 1073 aa15.07■□□□□ 0
RDH13-219ENST00000591960 DNAJB1P25685 340 aa15.07■□□□□ 0
RDH13-219ENST00000591960 NASPP49321 788 aaPredicted RBP15.07■□□□□ 0
RDH13-219ENST00000591960 CAMK1Q14012 370 aa15.07■□□□□ 0
RDH13-219ENST00000591960 SLC39A14Q15043 492 aa15.07■□□□□ 0
RDH13-219ENST00000591960 FAM187BQ17R55 369 aa15.07■□□□□ 0
RDH13-219ENST00000591960 NOTUMQ6P988 496 aa15.07■□□□□ 0
RDH13-219ENST00000591960 CDR2LQ86X02 465 aaPredicted RBP15.07■□□□□ 0
RDH13-219ENST00000591960 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.07■□□□□ 0
RDH13-219ENST00000591960 KLHL23Q8NBE8 558 aa15.07■□□□□ 0
RDH13-219ENST00000591960 SLC17A8Q8NDX2 589 aa15.07■□□□□ 0
RDH13-219ENST00000591960 P2RX5Q93086 422 aa15.07■□□□□ 0
RDH13-219ENST00000591960 CDK5RAP3Q96JB5 506 aa15.07■□□□□ 0
RDH13-219ENST00000591960 CCSER1Q9C0I3 900 aa15.07■□□□□ 0
RDH13-219ENST00000591960 C2orf40Q9H1Z8 148 aa15.07■□□□□ 0
RDH13-219ENST00000591960 ALG13Q9NP73 1137 aaKnown RBP15.07■□□□□ 0
RDH13-219ENST00000591960 PLAGL2Q9UPG8 496 aa15.07■□□□□ 0
RDH13-219ENST00000591960 USP20Q9Y2K6 914 aa15.07■□□□□ 0
RDH13-219ENST00000591960 MYH11P35749 1972 aa15.06■□□□□ 0
RDH13-219ENST00000591960 VCANP13611 3396 aa15.06■□□□□ 0
RDH13-219ENST00000591960 OFD1O75665 1012 aa15.06■□□□□ 0
RDH13-219ENST00000591960 F13A1P00488 732 aa15.06■□□□□ 0
RDH13-219ENST00000591960 SSBP05455 408 aaKnown RBP eCLIP15.06■□□□□ 0
RDH13-219ENST00000591960 PLCG1P19174 1290 aa15.06■□□□□ 0
RDH13-219ENST00000591960 NCLP19338 710 aaKnown RBP15.06■□□□□ 0
RDH13-219ENST00000591960 AFF1P51825 1210 aaKnown RBP15.06■□□□□ 0
RDH13-219ENST00000591960 RAD51AP2Q09MP3 1159 aa15.06■□□□□ 0
RDH13-219ENST00000591960 PPP2R5AQ15172 486 aa15.06■□□□□ 0
RDH13-219ENST00000591960 ARSHQ5FYA8 562 aa15.06■□□□□ 0
RDH13-219ENST00000591960 ZBTB8OSQ8IWT0 167 aa15.06■□□□□ 0
RDH13-219ENST00000591960 ABI1Q8IZP0 508 aa15.06■□□□□ 0
RDH13-219ENST00000591960 LRRC43Q8N309 656 aa15.06■□□□□ 0
RDH13-219ENST00000591960 COLGALT1Q8NBJ5 622 aa15.06■□□□□ 0
RDH13-219ENST00000591960 LINC00301Q8NCQ3 95 aa15.06■□□□□ 0
RDH13-219ENST00000591960 DEPTORQ8TB45 409 aa15.06■□□□□ 0
RDH13-219ENST00000591960 SPPL3Q8TCT6 385 aa15.06■□□□□ 0
RDH13-219ENST00000591960 SYMPKQ92797 1274 aaKnown RBP15.06■□□□□ 0
RDH13-219ENST00000591960 CCDC51Q96ER9 411 aa15.06■□□□□ 0
RDH13-219ENST00000591960 CALML4Q96GE6 196 aa15.06■□□□□ 0
RDH13-219ENST00000591960 IFT74Q96LB3 600 aa15.06■□□□□ 0
RDH13-219ENST00000591960 RNF39Q9H2S5 420 aa15.06■□□□□ 0
RDH13-219ENST00000591960 PRMT7Q9NVM4 692 aaPredicted RBP15.06■□□□□ 0
RDH13-219ENST00000591960 TFIP11Q9UBB9 837 aaKnown RBP15.06■□□□□ 0
RDH13-219ENST00000591960 IPPQ9Y573 584 aa15.06■□□□□ 0
RDH13-219ENST00000591960 CNTNAP2Q9UHC6 1331 aa15.06■□□□□ 0
RDH13-219ENST00000591960 MYO7AQ13402 2215 aa15.05■□□□□ 0
RDH13-219ENST00000591960 NPHP3-ACAD11A0A0J9YXS1 232 aa15.05■□□□□ -0
RDH13-219ENST00000591960 A0A1B0GUA9 196 aa15.05■□□□□ -0
RDH13-219ENST00000591960 SFI1A8K8P3 1242 aa15.05■□□□□ -0
RDH13-219ENST00000591960 PRKCBP05771 671 aa15.05■□□□□ -0
RDH13-219ENST00000591960 PBX3P40426 434 aa15.05■□□□□ -0
RDH13-219ENST00000591960 NPTX2P47972 431 aa15.05■□□□□ -0
RDH13-219ENST00000591960 PEX3P56589 373 aa15.05■□□□□ -0
RDH13-219ENST00000591960 NAALADL2Q58DX5 795 aa15.05■□□□□ -0
RDH13-219ENST00000591960 SPOUT1Q5T280 376 aaKnown RBP15.05■□□□□ -0
RDH13-219ENST00000591960 PGBD4Q96DM1 585 aa15.05■□□□□ -0
RDH13-219ENST00000591960 PRIMPOLQ96LW4 560 aa15.05■□□□□ -0
RDH13-219ENST00000591960 LMAN2LQ9H0V9 348 aa15.05■□□□□ -0
RDH13-219ENST00000591960 HES2Q9Y543 173 aa15.05■□□□□ -0
RDH13-219ENST00000591960 ACKR2O00590 384 aa15.04■□□□□ -0
RDH13-219ENST00000591960 B4GALT3O60512 393 aa15.04■□□□□ -0
RDH13-219ENST00000591960 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
RDH13-219ENST00000591960 PDIA4P13667 645 aaKnown RBP15.04■□□□□ -0
RDH13-219ENST00000591960 LAG3P18627 525 aa15.04■□□□□ -0
RDH13-219ENST00000591960 CACNB1Q02641 598 aaPredicted RBP15.04■□□□□ -0
RDH13-219ENST00000591960 NCBP1Q09161 790 aaKnown RBP15.04■□□□□ -0
RDH13-219ENST00000591960 MCM6Q14566 821 aa15.04■□□□□ -0
RDH13-219ENST00000591960 MAPK6Q16659 721 aa15.04■□□□□ -0
RDH13-219ENST00000591960 PTPROQ16827 1216 aa15.04■□□□□ -0
RDH13-219ENST00000591960 FOXD4L6Q3SYB3 417 aaPredicted RBP15.04■□□□□ -0
RDH13-219ENST00000591960 NOMO2Q5JPE7 1267 aa15.04■□□□□ -0
RDH13-219ENST00000591960 SLC27A1Q6PCB7 646 aa15.04■□□□□ -0
RDH13-219ENST00000591960 FOXD4L3Q6VB84 417 aaPredicted RBP15.04■□□□□ -0
RDH13-219ENST00000591960 TAS1R3Q7RTX0 852 aa15.04■□□□□ -0
RDH13-219ENST00000591960 KRI1Q8N9T8 703 aaKnown RBP15.04■□□□□ -0
RDH13-219ENST00000591960 RAD54LQ92698 747 aa15.04■□□□□ -0
RDH13-219ENST00000591960 DRC1Q96MC2 740 aa15.04■□□□□ -0
RDH13-219ENST00000591960 TIPINQ9BVW5 301 aa15.04■□□□□ -0
RDH13-219ENST00000591960 NXF3Q9H4D5 531 aaKnown RBP15.04■□□□□ -0
RDH13-219ENST00000591960 PDZD7Q9H5P4 517 aa15.04■□□□□ -0
RDH13-219ENST00000591960 RSAD1Q9HA92 442 aa15.04■□□□□ -0
RDH13-219ENST00000591960 AAASQ9NRG9 546 aa15.04■□□□□ -0
RDH13-219ENST00000591960 TBC1D13Q9NVG8 400 aa15.04■□□□□ -0
RDH13-219ENST00000591960 ARHGAP28Q9P2N2 729 aa15.04■□□□□ -0
RDH13-219ENST00000591960 INPP5FQ9Y2H2 1132 aa15.04■□□□□ -0
RDH13-219ENST00000591960 ZDHHC9Q9Y397 364 aa15.04■□□□□ -0
RDH13-219ENST00000591960 PCDHB12Q9Y5F1 795 aa15.04■□□□□ -0
RDH13-219ENST00000591960 A0A087X0B3 334 aa15.03■□□□□ -0
RDH13-219ENST00000591960 CCDC169A6NNP5 214 aa15.03■□□□□ -0
RDH13-219ENST00000591960 FGF18O76093 207 aa15.03■□□□□ -0
RDH13-219ENST00000591960 CSPG5O95196 566 aa15.03■□□□□ -0
RDH13-219ENST00000591960 NPTXRO95502 500 aa15.03■□□□□ -0
RDH13-219ENST00000591960 ITGA4P13612 1032 aa15.03■□□□□ -0
RDH13-219ENST00000591960 LIG1P18858 919 aa15.03■□□□□ -0
RDH13-219ENST00000591960 EFNA5P52803 228 aa15.03■□□□□ -0
RDH13-219ENST00000591960 PRPF4BQ13523 1007 aaKnown RBP15.03■□□□□ -0
RDH13-219ENST00000591960 DHX8Q14562 1220 aaKnown RBP15.03■□□□□ -0
RDH13-219ENST00000591960 STK38Q15208 465 aa15.03■□□□□ -0
RDH13-219ENST00000591960 TCEAL5Q5H9L2 206 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms